Gene : Phvul.007G264200 P. vulgaris v2.1
Defline:  (1 of 2) K02989 - small subunit ribosomal protein S5e (RP-S5e, RPS5) Genomic Order:  2501
Name:  ? Phvul.007G264200 Secondary Identifier:  ? PAC:37166378
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G264200 0.5kb upstream 0.5kb upstream 3565 true Chr07: 38552589-38556153 Phaseolus vulgaris
Phvul.007G264200 0.5kb upstream 0.5kb upstream 500 false Chr07: 38552589-38553088 Phaseolus vulgaris
Phvul.007G264200 0.5kb downstream 0.5kb downstream 3565 true Chr07: 38553089-38556653 Phaseolus vulgaris
Phvul.007G264200 0.5kb downstream 0.5kb downstream 500 false Chr07: 38556154-38556653 Phaseolus vulgaris
Phvul.007G264200 1.0kb upstream 1.0kb upstream 4065 true Chr07: 38552089-38556153 Phaseolus vulgaris
Phvul.007G264200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 38552089-38553088 Phaseolus vulgaris
Phvul.007G264200 1.0kb downstream 1.0kb downstream 4065 true Chr07: 38553089-38557153 Phaseolus vulgaris
Phvul.007G264200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 38556154-38557153 Phaseolus vulgaris
Phvul.007G264200 2.0kb upstream 2.0kb upstream 5065 true Chr07: 38551089-38556153 Phaseolus vulgaris
Phvul.007G264200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 38551089-38553088 Phaseolus vulgaris
Phvul.007G264200 2.0kb downstream 2.0kb downstream 5065 true Chr07: 38553089-38558153 Phaseolus vulgaris
Phvul.007G264200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 38556154-38558153 Phaseolus vulgaris
Phvul.007G264200 5.0kb upstream 5.0kb upstream 8065 true Chr07: 38548089-38556153 Phaseolus vulgaris
Phvul.007G264200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 38548089-38553088 Phaseolus vulgaris
Phvul.007G264200 5.0kb downstream 5.0kb downstream 8065 true Chr07: 38553089-38561153 Phaseolus vulgaris
Phvul.007G264200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 38556154-38561153 Phaseolus vulgaris
Phvul.007G264200 10.0kb upstream 10.0kb upstream 13065 true Chr07: 38543089-38556153 Phaseolus vulgaris
Phvul.007G264200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 38543089-38553088 Phaseolus vulgaris
Phvul.007G264200 10.0kb downstream 10.0kb downstream 13065 true Chr07: 38553089-38566153 Phaseolus vulgaris
Phvul.007G264200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 38556154-38566153 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311840 5265 Fabidae View MSA
124064641 5270 Rosid View MSA
123749742 5271 Pentapetalae View MSA
122785829 5272 Eudicot View MSA
122048966 5273 Angiosperm View MSA
121345669 5274 Embryophyte View MSA
123423957 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 82.2798 0.0 215.004 High  
cufflinks 147.883 0.0 402.49 High High
cufflinks 67.8 0.0 175.849 High  
cufflinks 142.395 0.0 386.039 High High
cufflinks 108.63 0.0 287.48 High  
cufflinks 68.5368 0.0 177.772 High  
cufflinks 88.9386 0.0 233.216 High  
cufflinks 99.7638 0.0 263.677 High  
cufflinks 132.896 0.0 358.63 High  
cufflinks 40.3279 0.0 104.559 High Low
cufflinks 92.1387 0.0 241.564 High  

0 Strain