Gene : Phvul.005G125900 P. vulgaris v2.1
Genomic Order:  1266 Name:  ? Phvul.005G125900
Secondary Identifier:  ? PAC:37153182
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G125900 0.5kb upstream 0.5kb upstream 4090 true Chr05: 36316957-36321046 Phaseolus vulgaris
Phvul.005G125900 0.5kb upstream 0.5kb upstream 500 false Chr05: 36316957-36317456 Phaseolus vulgaris
Phvul.005G125900 0.5kb downstream 0.5kb downstream 4090 true Chr05: 36317457-36321546 Phaseolus vulgaris
Phvul.005G125900 0.5kb downstream 0.5kb downstream 500 false Chr05: 36321047-36321546 Phaseolus vulgaris
Phvul.005G125900 1.0kb upstream 1.0kb upstream 4590 true Chr05: 36316457-36321046 Phaseolus vulgaris
Phvul.005G125900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36316457-36317456 Phaseolus vulgaris
Phvul.005G125900 1.0kb downstream 1.0kb downstream 4590 true Chr05: 36317457-36322046 Phaseolus vulgaris
Phvul.005G125900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36321047-36322046 Phaseolus vulgaris
Phvul.005G125900 2.0kb upstream 2.0kb upstream 5590 true Chr05: 36315457-36321046 Phaseolus vulgaris
Phvul.005G125900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36315457-36317456 Phaseolus vulgaris
Phvul.005G125900 2.0kb downstream 2.0kb downstream 5590 true Chr05: 36317457-36323046 Phaseolus vulgaris
Phvul.005G125900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36321047-36323046 Phaseolus vulgaris
Phvul.005G125900 5.0kb upstream 5.0kb upstream 8590 true Chr05: 36312457-36321046 Phaseolus vulgaris
Phvul.005G125900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36312457-36317456 Phaseolus vulgaris
Phvul.005G125900 5.0kb downstream 5.0kb downstream 8590 true Chr05: 36317457-36326046 Phaseolus vulgaris
Phvul.005G125900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36321047-36326046 Phaseolus vulgaris
Phvul.005G125900 10.0kb upstream 10.0kb upstream 13590 true Chr05: 36307457-36321046 Phaseolus vulgaris
Phvul.005G125900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36307457-36317456 Phaseolus vulgaris
Phvul.005G125900 10.0kb downstream 10.0kb downstream 13590 true Chr05: 36317457-36331046 Phaseolus vulgaris
Phvul.005G125900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36321047-36331046 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300110 5265 Fabidae View MSA
124068501 5270 Rosid View MSA
123737961 5271 Pentapetalae View MSA
122793234 5272 Eudicot View MSA
122041873 5273 Angiosperm View MSA
121343989 5274 Embryophyte View MSA
123379952 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.34796 0.0 10.7698   High
cufflinks 2.94831 0.0 9.60553    
cufflinks 2.02047 0.0 6.87087    
cufflinks 3.53242 0.0 11.3745   High
cufflinks 1.82198 0.0 6.34097   Low
cufflinks 2.05969 0.0 6.98558    
cufflinks 2.72843 0.0 8.93091    
cufflinks 2.61403 0.0 8.56261    
cufflinks 2.59814 0.0 8.57247    
cufflinks 2.07409 0.0 7.04482    
cufflinks 2.30459 0.0 7.75953    

0 Strain