Gene : Phvul.007G265100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24349:SF81 - CALCIUM-DEPENDENT PROTEIN KINASE 20 Genomic Order:  2510
Name:  ? Phvul.007G265100 Secondary Identifier:  ? PAC:37167234
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G265100 0.5kb upstream 0.5kb upstream 6954 true Chr07: 38623003-38629956 Phaseolus vulgaris
Phvul.007G265100 0.5kb upstream 0.5kb upstream 500 false Chr07: 38629457-38629956 Phaseolus vulgaris
Phvul.007G265100 0.5kb downstream 0.5kb downstream 6954 true Chr07: 38622503-38629456 Phaseolus vulgaris
Phvul.007G265100 0.5kb downstream 0.5kb downstream 500 false Chr07: 38622503-38623002 Phaseolus vulgaris
Phvul.007G265100 1.0kb upstream 1.0kb upstream 7454 true Chr07: 38623003-38630456 Phaseolus vulgaris
Phvul.007G265100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 38629457-38630456 Phaseolus vulgaris
Phvul.007G265100 1.0kb downstream 1.0kb downstream 7454 true Chr07: 38622003-38629456 Phaseolus vulgaris
Phvul.007G265100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 38622003-38623002 Phaseolus vulgaris
Phvul.007G265100 2.0kb upstream 2.0kb upstream 8454 true Chr07: 38623003-38631456 Phaseolus vulgaris
Phvul.007G265100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 38629457-38631456 Phaseolus vulgaris
Phvul.007G265100 2.0kb downstream 2.0kb downstream 8454 true Chr07: 38621003-38629456 Phaseolus vulgaris
Phvul.007G265100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 38621003-38623002 Phaseolus vulgaris
Phvul.007G265100 5.0kb upstream 5.0kb upstream 11454 true Chr07: 38623003-38634456 Phaseolus vulgaris
Phvul.007G265100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 38629457-38634456 Phaseolus vulgaris
Phvul.007G265100 5.0kb downstream 5.0kb downstream 11454 true Chr07: 38618003-38629456 Phaseolus vulgaris
Phvul.007G265100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 38618003-38623002 Phaseolus vulgaris
Phvul.007G265100 10.0kb upstream 10.0kb upstream 16454 true Chr07: 38623003-38639456 Phaseolus vulgaris
Phvul.007G265100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 38629457-38639456 Phaseolus vulgaris
Phvul.007G265100 10.0kb downstream 10.0kb downstream 16454 true Chr07: 38613003-38629456 Phaseolus vulgaris
Phvul.007G265100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 38613003-38623002 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299570 5265 Fabidae View MSA
124067641 5270 Rosid View MSA
123746837 5271 Pentapetalae View MSA
122788348 5272 Eudicot View MSA
122047309 5273 Angiosperm View MSA
121350946 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.983858 0.0 3.09906    
cufflinks 0.493408 0.0 1.68166    
cufflinks 0.0935154 0.0 0.371155 Low Low
cufflinks 1.21157 0.0 3.73826   High
cufflinks 0.473241 0.0 1.62392 Low  
cufflinks 0.768678 0.0 2.49089    
cufflinks 0.806328 0.0 2.57503    
cufflinks 0.808895 0.0 2.59728    
cufflinks 0.357436 0.0 1.2537 Low  
cufflinks 0.483627 0.0 1.65602    
cufflinks 0.965372 0.0 3.04392    

0 Strain