Gene : Phvul.005G124800 P. vulgaris v2.1
Defline:  (1 of 10) PTHR10593//PTHR10593:SF27 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Genomic Order:  1254
Name:  ? Phvul.005G124800 Secondary Identifier:  ? PAC:37153937
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G124800 0.5kb upstream 0.5kb upstream 4211 true Chr05: 36197012-36201222 Phaseolus vulgaris
Phvul.005G124800 0.5kb upstream 0.5kb upstream 500 false Chr05: 36197012-36197511 Phaseolus vulgaris
Phvul.005G124800 0.5kb downstream 0.5kb downstream 4211 true Chr05: 36197512-36201722 Phaseolus vulgaris
Phvul.005G124800 0.5kb downstream 0.5kb downstream 500 false Chr05: 36201223-36201722 Phaseolus vulgaris
Phvul.005G124800 1.0kb upstream 1.0kb upstream 4711 true Chr05: 36196512-36201222 Phaseolus vulgaris
Phvul.005G124800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36196512-36197511 Phaseolus vulgaris
Phvul.005G124800 1.0kb downstream 1.0kb downstream 4711 true Chr05: 36197512-36202222 Phaseolus vulgaris
Phvul.005G124800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36201223-36202222 Phaseolus vulgaris
Phvul.005G124800 2.0kb upstream 2.0kb upstream 5711 true Chr05: 36195512-36201222 Phaseolus vulgaris
Phvul.005G124800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36195512-36197511 Phaseolus vulgaris
Phvul.005G124800 2.0kb downstream 2.0kb downstream 5711 true Chr05: 36197512-36203222 Phaseolus vulgaris
Phvul.005G124800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36201223-36203222 Phaseolus vulgaris
Phvul.005G124800 5.0kb upstream 5.0kb upstream 8711 true Chr05: 36192512-36201222 Phaseolus vulgaris
Phvul.005G124800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36192512-36197511 Phaseolus vulgaris
Phvul.005G124800 5.0kb downstream 5.0kb downstream 8711 true Chr05: 36197512-36206222 Phaseolus vulgaris
Phvul.005G124800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36201223-36206222 Phaseolus vulgaris
Phvul.005G124800 10.0kb upstream 10.0kb upstream 13711 true Chr05: 36187512-36201222 Phaseolus vulgaris
Phvul.005G124800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36187512-36197511 Phaseolus vulgaris
Phvul.005G124800 10.0kb downstream 10.0kb downstream 13711 true Chr05: 36197512-36211222 Phaseolus vulgaris
Phvul.005G124800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36201223-36211222 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027572 5273 Angiosperm View MSA
122301122 5265 Fabidae View MSA
124060498 5270 Rosid View MSA
123741647 5271 Pentapetalae View MSA
122787233 5272 Eudicot View MSA
121297208 5274 Embryophyte View MSA
123428588 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.66808 0.0 5.52778    
cufflinks 1.22275 0.0 4.20668    
cufflinks 1.40554 0.0 4.73412    
cufflinks 0.498282 0.0 1.8777 Low Low
cufflinks 2.88421 0.0 9.06121    
cufflinks 1.59301 0.0 5.30678    
cufflinks 3.21635 0.0 9.8869    
cufflinks 8.20465 0.0 22.7203   High
cufflinks 1.15328 0.0 3.99074    
cufflinks 3.20868 0.0 9.93588    
cufflinks 6.42074 0.0 18.4268   High

0 Strain