Gene : Phvul.005G126800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10792:SF8 - RIBOSOME BIOGENESIS PROTEIN RLP24-RELATED Genomic Order:  1275
Name:  ? Phvul.005G126800 Secondary Identifier:  ? PAC:37152764
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G126800 0.5kb upstream 0.5kb upstream 2280 true Chr05: 36442278-36444557 Phaseolus vulgaris
Phvul.005G126800 0.5kb upstream 0.5kb upstream 500 false Chr05: 36444058-36444557 Phaseolus vulgaris
Phvul.005G126800 0.5kb downstream 0.5kb downstream 2280 true Chr05: 36441778-36444057 Phaseolus vulgaris
Phvul.005G126800 0.5kb downstream 0.5kb downstream 500 false Chr05: 36441778-36442277 Phaseolus vulgaris
Phvul.005G126800 1.0kb upstream 1.0kb upstream 2780 true Chr05: 36442278-36445057 Phaseolus vulgaris
Phvul.005G126800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36444058-36445057 Phaseolus vulgaris
Phvul.005G126800 1.0kb downstream 1.0kb downstream 2780 true Chr05: 36441278-36444057 Phaseolus vulgaris
Phvul.005G126800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36441278-36442277 Phaseolus vulgaris
Phvul.005G126800 2.0kb upstream 2.0kb upstream 3780 true Chr05: 36442278-36446057 Phaseolus vulgaris
Phvul.005G126800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36444058-36446057 Phaseolus vulgaris
Phvul.005G126800 2.0kb downstream 2.0kb downstream 3780 true Chr05: 36440278-36444057 Phaseolus vulgaris
Phvul.005G126800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36440278-36442277 Phaseolus vulgaris
Phvul.005G126800 5.0kb upstream 5.0kb upstream 6780 true Chr05: 36442278-36449057 Phaseolus vulgaris
Phvul.005G126800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36444058-36449057 Phaseolus vulgaris
Phvul.005G126800 5.0kb downstream 5.0kb downstream 6780 true Chr05: 36437278-36444057 Phaseolus vulgaris
Phvul.005G126800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36437278-36442277 Phaseolus vulgaris
Phvul.005G126800 10.0kb upstream 10.0kb upstream 11780 true Chr05: 36442278-36454057 Phaseolus vulgaris
Phvul.005G126800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36444058-36454057 Phaseolus vulgaris
Phvul.005G126800 10.0kb downstream 10.0kb downstream 11780 true Chr05: 36432278-36444057 Phaseolus vulgaris
Phvul.005G126800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36432278-36442277 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303025 5265 Fabidae View MSA
124060903 5270 Rosid View MSA
123737225 5271 Pentapetalae View MSA
122786716 5272 Eudicot View MSA
122045898 5273 Angiosperm View MSA
121346492 5274 Embryophyte View MSA
123427829 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.1878 0.0 114.281 High  
cufflinks 55.9352 0.0 144.724 High High
cufflinks 19.717 0.0 52.9165   Low
cufflinks 47.7203 0.0 123.38 High  
cufflinks 38.0718 0.0 98.8682 High  
cufflinks 16.9075 0.0 45.9038   Low
cufflinks 32.2671 0.0 83.8072 High  
cufflinks 37.7066 0.0 97.6107 High  
cufflinks 35.4666 0.0 91.8987 High  
cufflinks 49.577 0.0 128.149 High  
cufflinks 39.2114 0.0 101.599 High  

0 Strain