Gene : Phvul.005G127000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11119:SF28 - NUCLEOBASE-ASCORBATE TRANSPORTER 12 Genomic Order:  1277
Name:  ? Phvul.005G127000 Secondary Identifier:  ? PAC:37153230
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G127000 0.5kb upstream 0.5kb upstream 6914 true Chr05: 36451541-36458454 Phaseolus vulgaris
Phvul.005G127000 0.5kb upstream 0.5kb upstream 500 false Chr05: 36451541-36452040 Phaseolus vulgaris
Phvul.005G127000 0.5kb downstream 0.5kb downstream 6914 true Chr05: 36452041-36458954 Phaseolus vulgaris
Phvul.005G127000 0.5kb downstream 0.5kb downstream 500 false Chr05: 36458455-36458954 Phaseolus vulgaris
Phvul.005G127000 1.0kb upstream 1.0kb upstream 7414 true Chr05: 36451041-36458454 Phaseolus vulgaris
Phvul.005G127000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36451041-36452040 Phaseolus vulgaris
Phvul.005G127000 1.0kb downstream 1.0kb downstream 7414 true Chr05: 36452041-36459454 Phaseolus vulgaris
Phvul.005G127000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36458455-36459454 Phaseolus vulgaris
Phvul.005G127000 2.0kb upstream 2.0kb upstream 8414 true Chr05: 36450041-36458454 Phaseolus vulgaris
Phvul.005G127000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36450041-36452040 Phaseolus vulgaris
Phvul.005G127000 2.0kb downstream 2.0kb downstream 8414 true Chr05: 36452041-36460454 Phaseolus vulgaris
Phvul.005G127000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36458455-36460454 Phaseolus vulgaris
Phvul.005G127000 5.0kb upstream 5.0kb upstream 11414 true Chr05: 36447041-36458454 Phaseolus vulgaris
Phvul.005G127000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36447041-36452040 Phaseolus vulgaris
Phvul.005G127000 5.0kb downstream 5.0kb downstream 11414 true Chr05: 36452041-36463454 Phaseolus vulgaris
Phvul.005G127000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36458455-36463454 Phaseolus vulgaris
Phvul.005G127000 10.0kb upstream 10.0kb upstream 16414 true Chr05: 36442041-36458454 Phaseolus vulgaris
Phvul.005G127000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36442041-36452040 Phaseolus vulgaris
Phvul.005G127000 10.0kb downstream 10.0kb downstream 16414 true Chr05: 36452041-36468454 Phaseolus vulgaris
Phvul.005G127000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36458455-36468454 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312562 5265 Fabidae View MSA
124074779 5270 Rosid View MSA
123742744 5271 Pentapetalae View MSA
122788188 5272 Eudicot View MSA
122046196 5273 Angiosperm View MSA
121347942 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.45844 0.0 9.78194   Low
cufflinks 17.353 0.0 44.8652   High
cufflinks 17.6091 0.0 45.5276   High
cufflinks 8.75378 0.0 22.9927    
cufflinks 13.3523 0.0 34.5476    
cufflinks 15.0947 0.0 39.027    
cufflinks 7.37948 0.0 19.5764    
cufflinks 8.81615 0.0 23.1439    
cufflinks 7.04451 0.0 18.8014    
cufflinks 6.64447 0.0 17.7766    
cufflinks 13.8582 0.0 35.848    

0 Strain