Gene : Phvul.005G127400 P. vulgaris v2.1
Defline:  (1 of 2) K05757 - actin related protein 2/3 complex, subunit 1A/1B (ARPC1A_B) Genomic Order:  1281
Name:  ? Phvul.005G127400 Secondary Identifier:  ? PAC:37154220
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G127400 0.5kb upstream 0.5kb upstream 9507 true Chr05: 36509774-36519280 Phaseolus vulgaris
Phvul.005G127400 0.5kb upstream 0.5kb upstream 500 false Chr05: 36509774-36510273 Phaseolus vulgaris
Phvul.005G127400 0.5kb downstream 0.5kb downstream 9507 true Chr05: 36510274-36519780 Phaseolus vulgaris
Phvul.005G127400 0.5kb downstream 0.5kb downstream 500 false Chr05: 36519281-36519780 Phaseolus vulgaris
Phvul.005G127400 1.0kb upstream 1.0kb upstream 10007 true Chr05: 36509274-36519280 Phaseolus vulgaris
Phvul.005G127400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36509274-36510273 Phaseolus vulgaris
Phvul.005G127400 1.0kb downstream 1.0kb downstream 10007 true Chr05: 36510274-36520280 Phaseolus vulgaris
Phvul.005G127400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36519281-36520280 Phaseolus vulgaris
Phvul.005G127400 2.0kb upstream 2.0kb upstream 11007 true Chr05: 36508274-36519280 Phaseolus vulgaris
Phvul.005G127400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36508274-36510273 Phaseolus vulgaris
Phvul.005G127400 2.0kb downstream 2.0kb downstream 11007 true Chr05: 36510274-36521280 Phaseolus vulgaris
Phvul.005G127400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36519281-36521280 Phaseolus vulgaris
Phvul.005G127400 5.0kb upstream 5.0kb upstream 14007 true Chr05: 36505274-36519280 Phaseolus vulgaris
Phvul.005G127400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36505274-36510273 Phaseolus vulgaris
Phvul.005G127400 5.0kb downstream 5.0kb downstream 14007 true Chr05: 36510274-36524280 Phaseolus vulgaris
Phvul.005G127400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36519281-36524280 Phaseolus vulgaris
Phvul.005G127400 10.0kb upstream 10.0kb upstream 19007 true Chr05: 36500274-36519280 Phaseolus vulgaris
Phvul.005G127400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36500274-36510273 Phaseolus vulgaris
Phvul.005G127400 10.0kb downstream 10.0kb downstream 19007 true Chr05: 36510274-36529280 Phaseolus vulgaris
Phvul.005G127400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36519281-36529280 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302937 5265 Fabidae View MSA
124063106 5270 Rosid View MSA
123746125 5271 Pentapetalae View MSA
122786380 5272 Eudicot View MSA
122051463 5273 Angiosperm View MSA
121344738 5274 Embryophyte View MSA
123424487 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.7723 0.0 48.9764   High
cufflinks 12.6862 0.0 33.924    
cufflinks 8.22329 0.0 22.7633   Low
cufflinks 12.173 0.0 32.8897    
cufflinks 10.9335 0.0 29.7547    
cufflinks 8.5568 0.0 23.6591    
cufflinks 9.87864 0.0 26.9743    
cufflinks 10.8382 0.0 29.2245    
cufflinks 9.40242 0.0 25.857    
cufflinks 26.3902 0.0 68.2685   High
cufflinks 13.0948 0.0 35.0546    

0 Strain