Gene : Phvul.007G250600 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11728:SF17 - 6-PHOSPHOGLUCONATE DEHYDROGENASE-LIKE PROTEIN Genomic Order:  2361
Name:  ? Phvul.007G250600 Secondary Identifier:  ? PAC:37167343
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6118 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7411 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G250600 0.5kb upstream 0.5kb upstream 6062 true Chr07: 37291361-37297422 Phaseolus vulgaris
Phvul.007G250600 0.5kb upstream 0.5kb upstream 500 false Chr07: 37291361-37291860 Phaseolus vulgaris
Phvul.007G250600 0.5kb downstream 0.5kb downstream 6062 true Chr07: 37291861-37297922 Phaseolus vulgaris
Phvul.007G250600 0.5kb downstream 0.5kb downstream 500 false Chr07: 37297423-37297922 Phaseolus vulgaris
Phvul.007G250600 1.0kb upstream 1.0kb upstream 6562 true Chr07: 37290861-37297422 Phaseolus vulgaris
Phvul.007G250600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37290861-37291860 Phaseolus vulgaris
Phvul.007G250600 1.0kb downstream 1.0kb downstream 6562 true Chr07: 37291861-37298422 Phaseolus vulgaris
Phvul.007G250600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37297423-37298422 Phaseolus vulgaris
Phvul.007G250600 2.0kb upstream 2.0kb upstream 7562 true Chr07: 37289861-37297422 Phaseolus vulgaris
Phvul.007G250600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37289861-37291860 Phaseolus vulgaris
Phvul.007G250600 2.0kb downstream 2.0kb downstream 7562 true Chr07: 37291861-37299422 Phaseolus vulgaris
Phvul.007G250600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37297423-37299422 Phaseolus vulgaris
Phvul.007G250600 5.0kb upstream 5.0kb upstream 10562 true Chr07: 37286861-37297422 Phaseolus vulgaris
Phvul.007G250600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37286861-37291860 Phaseolus vulgaris
Phvul.007G250600 5.0kb downstream 5.0kb downstream 10562 true Chr07: 37291861-37302422 Phaseolus vulgaris
Phvul.007G250600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37297423-37302422 Phaseolus vulgaris
Phvul.007G250600 10.0kb upstream 10.0kb upstream 15562 true Chr07: 37281861-37297422 Phaseolus vulgaris
Phvul.007G250600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37281861-37291860 Phaseolus vulgaris
Phvul.007G250600 10.0kb downstream 10.0kb downstream 15562 true Chr07: 37291861-37307422 Phaseolus vulgaris
Phvul.007G250600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37297423-37307422 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311810 5265 Fabidae View MSA
124069658 5270 Rosid View MSA
123738520 5271 Pentapetalae View MSA
122790520 5272 Eudicot View MSA
122046820 5273 Angiosperm View MSA
121349677 5274 Embryophyte View MSA
123381397 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.10713 0.0 23.8219    
cufflinks 7.06636 0.0 39.7777    
cufflinks 5.25336 0.0 26.1948    
cufflinks 33.1523 0.0 163.811   High
cufflinks 4.44182 0.0 18.1595    
cufflinks 10.1002 0.0 49.2026    
cufflinks 2.76023 0.0 11.2513    
cufflinks 2.12085 0.0 15.1799    
cufflinks 2.10285 0.0 14.6491    
cufflinks 1.62051 0.0 7.56162   Low
cufflinks 4.43601 0.0 21.2353    

0 Strain