Gene : Phvul.007G251800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22912:SF48 - NADPH-DEPENDENT THIOREDOXIN REDUCTASE 3 Genomic Order:  2373
Name:  ? Phvul.007G251800 Secondary Identifier:  ? PAC:37165453
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris THIOREDOX-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G251800 0.5kb upstream 0.5kb upstream 9738 true Chr07: 37384388-37394125 Phaseolus vulgaris
Phvul.007G251800 0.5kb upstream 0.5kb upstream 500 false Chr07: 37393626-37394125 Phaseolus vulgaris
Phvul.007G251800 0.5kb downstream 0.5kb downstream 9738 true Chr07: 37383888-37393625 Phaseolus vulgaris
Phvul.007G251800 0.5kb downstream 0.5kb downstream 500 false Chr07: 37383888-37384387 Phaseolus vulgaris
Phvul.007G251800 1.0kb upstream 1.0kb upstream 10238 true Chr07: 37384388-37394625 Phaseolus vulgaris
Phvul.007G251800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37393626-37394625 Phaseolus vulgaris
Phvul.007G251800 1.0kb downstream 1.0kb downstream 10238 true Chr07: 37383388-37393625 Phaseolus vulgaris
Phvul.007G251800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37383388-37384387 Phaseolus vulgaris
Phvul.007G251800 2.0kb upstream 2.0kb upstream 11238 true Chr07: 37384388-37395625 Phaseolus vulgaris
Phvul.007G251800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37393626-37395625 Phaseolus vulgaris
Phvul.007G251800 2.0kb downstream 2.0kb downstream 11238 true Chr07: 37382388-37393625 Phaseolus vulgaris
Phvul.007G251800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37382388-37384387 Phaseolus vulgaris
Phvul.007G251800 5.0kb upstream 5.0kb upstream 14238 true Chr07: 37384388-37398625 Phaseolus vulgaris
Phvul.007G251800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37393626-37398625 Phaseolus vulgaris
Phvul.007G251800 5.0kb downstream 5.0kb downstream 14238 true Chr07: 37379388-37393625 Phaseolus vulgaris
Phvul.007G251800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37379388-37384387 Phaseolus vulgaris
Phvul.007G251800 10.0kb upstream 10.0kb upstream 19238 true Chr07: 37384388-37403625 Phaseolus vulgaris
Phvul.007G251800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37393626-37403625 Phaseolus vulgaris
Phvul.007G251800 10.0kb downstream 10.0kb downstream 19238 true Chr07: 37374388-37393625 Phaseolus vulgaris
Phvul.007G251800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37374388-37384387 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301359 5265 Fabidae View MSA
124063608 5270 Rosid View MSA
123745502 5271 Pentapetalae View MSA
122789428 5272 Eudicot View MSA
122046832 5273 Angiosperm View MSA
121345870 5274 Embryophyte View MSA
123426423 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.79854 0.0 20.7111    
cufflinks 9.69273 0.0 25.445    
cufflinks 92.9736 0.0 272.554 High High
cufflinks 7.91158 0.0 21.099    
cufflinks 6.40509 0.0 17.3225    
cufflinks 30.0008 0.0 78.7032   High
cufflinks 3.57258 0.0 10.1298    
cufflinks 3.75482 0.0 10.5904    
cufflinks 3.40919 0.0 9.74579    
cufflinks 6.58682 0.0 17.7822    
cufflinks 6.20095 0.0 16.8291    

0 Strain