Gene : Phvul.007G252100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31642:SF24 - HXXXD-TYPE ACYL-TRANSFERASE-LIKE PROTEIN Genomic Order:  2376
Name:  ? Phvul.007G252100 Secondary Identifier:  ? PAC:37165512
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-4203 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5835 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6801 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G252100 0.5kb upstream 0.5kb upstream 2585 true Chr07: 37407279-37409863 Phaseolus vulgaris
Phvul.007G252100 0.5kb upstream 0.5kb upstream 500 false Chr07: 37407279-37407778 Phaseolus vulgaris
Phvul.007G252100 0.5kb downstream 0.5kb downstream 2585 true Chr07: 37407779-37410363 Phaseolus vulgaris
Phvul.007G252100 0.5kb downstream 0.5kb downstream 500 false Chr07: 37409864-37410363 Phaseolus vulgaris
Phvul.007G252100 1.0kb upstream 1.0kb upstream 3085 true Chr07: 37406779-37409863 Phaseolus vulgaris
Phvul.007G252100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37406779-37407778 Phaseolus vulgaris
Phvul.007G252100 1.0kb downstream 1.0kb downstream 3085 true Chr07: 37407779-37410863 Phaseolus vulgaris
Phvul.007G252100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37409864-37410863 Phaseolus vulgaris
Phvul.007G252100 2.0kb upstream 2.0kb upstream 4085 true Chr07: 37405779-37409863 Phaseolus vulgaris
Phvul.007G252100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37405779-37407778 Phaseolus vulgaris
Phvul.007G252100 2.0kb downstream 2.0kb downstream 4085 true Chr07: 37407779-37411863 Phaseolus vulgaris
Phvul.007G252100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37409864-37411863 Phaseolus vulgaris
Phvul.007G252100 5.0kb upstream 5.0kb upstream 7085 true Chr07: 37402779-37409863 Phaseolus vulgaris
Phvul.007G252100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37402779-37407778 Phaseolus vulgaris
Phvul.007G252100 5.0kb downstream 5.0kb downstream 7085 true Chr07: 37407779-37414863 Phaseolus vulgaris
Phvul.007G252100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37409864-37414863 Phaseolus vulgaris
Phvul.007G252100 10.0kb upstream 10.0kb upstream 12085 true Chr07: 37397779-37409863 Phaseolus vulgaris
Phvul.007G252100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37397779-37407778 Phaseolus vulgaris
Phvul.007G252100 10.0kb downstream 10.0kb downstream 12085 true Chr07: 37407779-37419863 Phaseolus vulgaris
Phvul.007G252100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37409864-37419863 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306898 5265 Fabidae View MSA
124061522 5270 Rosid View MSA
123756556 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.21918 0.0 17.4206   High
cufflinks 1.13931 0.0 3.84918    
cufflinks 0.43097 0.0 1.59883 Low  
cufflinks 14.447 0.0 37.9989   High
cufflinks 3.0951 0.0 9.40658    
cufflinks 0.23538 0.0 0.919055 Low Low
cufflinks 1.41444 0.0 4.66717    
cufflinks 0.460702 0.0 1.69666    
cufflinks 0.515971 0.0 1.89313    
cufflinks 0.105008 0.0 0.437452 Low Low
cufflinks 5.00317 0.0 14.3812    

0 Strain