Gene : Phvul.005G112800 P. vulgaris v2.1
Defline:  (1 of 85) PF01657 - Salt stress response/antifungal (Stress-antifung) Genomic Order:  1128
Name:  ? Phvul.005G112800 Secondary Identifier:  ? PAC:37154108
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G112800 0.5kb upstream 0.5kb upstream 1369 true Chr05: 34264189-34265557 Phaseolus vulgaris
Phvul.005G112800 0.5kb upstream 0.5kb upstream 500 false Chr05: 34265058-34265557 Phaseolus vulgaris
Phvul.005G112800 0.5kb downstream 0.5kb downstream 1369 true Chr05: 34263689-34265057 Phaseolus vulgaris
Phvul.005G112800 0.5kb downstream 0.5kb downstream 500 false Chr05: 34263689-34264188 Phaseolus vulgaris
Phvul.005G112800 1.0kb upstream 1.0kb upstream 1869 true Chr05: 34264189-34266057 Phaseolus vulgaris
Phvul.005G112800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34265058-34266057 Phaseolus vulgaris
Phvul.005G112800 1.0kb downstream 1.0kb downstream 1869 true Chr05: 34263189-34265057 Phaseolus vulgaris
Phvul.005G112800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34263189-34264188 Phaseolus vulgaris
Phvul.005G112800 2.0kb upstream 2.0kb upstream 2869 true Chr05: 34264189-34267057 Phaseolus vulgaris
Phvul.005G112800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34265058-34267057 Phaseolus vulgaris
Phvul.005G112800 2.0kb downstream 2.0kb downstream 2869 true Chr05: 34262189-34265057 Phaseolus vulgaris
Phvul.005G112800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34262189-34264188 Phaseolus vulgaris
Phvul.005G112800 5.0kb upstream 5.0kb upstream 5869 true Chr05: 34264189-34270057 Phaseolus vulgaris
Phvul.005G112800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34265058-34270057 Phaseolus vulgaris
Phvul.005G112800 5.0kb downstream 5.0kb downstream 5869 true Chr05: 34259189-34265057 Phaseolus vulgaris
Phvul.005G112800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34259189-34264188 Phaseolus vulgaris
Phvul.005G112800 10.0kb upstream 10.0kb upstream 10869 true Chr05: 34264189-34275057 Phaseolus vulgaris
Phvul.005G112800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34265058-34275057 Phaseolus vulgaris
Phvul.005G112800 10.0kb downstream 10.0kb downstream 10869 true Chr05: 34254189-34265057 Phaseolus vulgaris
Phvul.005G112800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34254189-34264188 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314892 5265 Fabidae View MSA
124074309 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3354 0.0 30.7153   High
cufflinks 2.12059 0.0 7.5337    
cufflinks 0.894839 0.0 3.4126   Low
cufflinks 11.1013 0.0 32.7798   High
cufflinks 5.336 0.0 17.2056    
cufflinks 0.758785 0.0 2.94082   Low
cufflinks 12.2647 0.0 35.8629   High
cufflinks 6.13501 0.0 19.3443    
cufflinks 3.40185 0.0 11.5197    
cufflinks 1.69518 0.0 6.1636    
cufflinks 2.84473 0.0 9.86283    

0 Strain