Gene : Phvul.005G112900 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10811//PTHR10811:SF19 - FRINGE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1129
Name:  ? Phvul.005G112900 Secondary Identifier:  ? PAC:37153280
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G112900 0.5kb upstream 0.5kb upstream 2031 true Chr05: 34279825-34281855 Phaseolus vulgaris
Phvul.005G112900 0.5kb upstream 0.5kb upstream 500 false Chr05: 34281356-34281855 Phaseolus vulgaris
Phvul.005G112900 0.5kb downstream 0.5kb downstream 2031 true Chr05: 34279325-34281355 Phaseolus vulgaris
Phvul.005G112900 0.5kb downstream 0.5kb downstream 500 false Chr05: 34279325-34279824 Phaseolus vulgaris
Phvul.005G112900 1.0kb upstream 1.0kb upstream 2531 true Chr05: 34279825-34282355 Phaseolus vulgaris
Phvul.005G112900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34281356-34282355 Phaseolus vulgaris
Phvul.005G112900 1.0kb downstream 1.0kb downstream 2531 true Chr05: 34278825-34281355 Phaseolus vulgaris
Phvul.005G112900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34278825-34279824 Phaseolus vulgaris
Phvul.005G112900 2.0kb upstream 2.0kb upstream 3531 true Chr05: 34279825-34283355 Phaseolus vulgaris
Phvul.005G112900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34281356-34283355 Phaseolus vulgaris
Phvul.005G112900 2.0kb downstream 2.0kb downstream 3531 true Chr05: 34277825-34281355 Phaseolus vulgaris
Phvul.005G112900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34277825-34279824 Phaseolus vulgaris
Phvul.005G112900 5.0kb upstream 5.0kb upstream 6531 true Chr05: 34279825-34286355 Phaseolus vulgaris
Phvul.005G112900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34281356-34286355 Phaseolus vulgaris
Phvul.005G112900 5.0kb downstream 5.0kb downstream 6531 true Chr05: 34274825-34281355 Phaseolus vulgaris
Phvul.005G112900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34274825-34279824 Phaseolus vulgaris
Phvul.005G112900 10.0kb upstream 10.0kb upstream 11531 true Chr05: 34279825-34291355 Phaseolus vulgaris
Phvul.005G112900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34281356-34291355 Phaseolus vulgaris
Phvul.005G112900 10.0kb downstream 10.0kb downstream 11531 true Chr05: 34269825-34281355 Phaseolus vulgaris
Phvul.005G112900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34269825-34279824 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298025 5265 Fabidae View MSA
124041698 5270 Rosid View MSA
123647558 5271 Pentapetalae View MSA
122681526 5272 Eudicot View MSA
122048571 5273 Angiosperm View MSA
121350591 5274 Embryophyte View MSA
123381812 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0479497 0.0 0.225151 Low  
cufflinks 0.0358146 0.0 0.172681 Low  
cufflinks 0.347693 0.0 1.3627 Low  
cufflinks 0.159502 0.0 0.663635 Low  
cufflinks 1.41767 0.0 4.91846   High
cufflinks 0.0145373 0.0 0.0777587 Low Low
cufflinks 0.028994 0.0 0.143841 Low  

0 Strain