Gene : Phvul.005G113600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR34126:SF1 - PEROXISOME BIOGENESIS PROTEIN 22 Genomic Order:  1136
Name:  ? Phvul.005G113600 Secondary Identifier:  ? PAC:37152747
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G113600 0.5kb upstream 0.5kb upstream 5242 true Chr05: 34338721-34343962 Phaseolus vulgaris
Phvul.005G113600 0.5kb upstream 0.5kb upstream 500 false Chr05: 34338721-34339220 Phaseolus vulgaris
Phvul.005G113600 0.5kb downstream 0.5kb downstream 5242 true Chr05: 34339221-34344462 Phaseolus vulgaris
Phvul.005G113600 0.5kb downstream 0.5kb downstream 500 false Chr05: 34343963-34344462 Phaseolus vulgaris
Phvul.005G113600 1.0kb upstream 1.0kb upstream 5742 true Chr05: 34338221-34343962 Phaseolus vulgaris
Phvul.005G113600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34338221-34339220 Phaseolus vulgaris
Phvul.005G113600 1.0kb downstream 1.0kb downstream 5742 true Chr05: 34339221-34344962 Phaseolus vulgaris
Phvul.005G113600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34343963-34344962 Phaseolus vulgaris
Phvul.005G113600 2.0kb upstream 2.0kb upstream 6742 true Chr05: 34337221-34343962 Phaseolus vulgaris
Phvul.005G113600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34337221-34339220 Phaseolus vulgaris
Phvul.005G113600 2.0kb downstream 2.0kb downstream 6742 true Chr05: 34339221-34345962 Phaseolus vulgaris
Phvul.005G113600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34343963-34345962 Phaseolus vulgaris
Phvul.005G113600 5.0kb upstream 5.0kb upstream 9742 true Chr05: 34334221-34343962 Phaseolus vulgaris
Phvul.005G113600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34334221-34339220 Phaseolus vulgaris
Phvul.005G113600 5.0kb downstream 5.0kb downstream 9742 true Chr05: 34339221-34348962 Phaseolus vulgaris
Phvul.005G113600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34343963-34348962 Phaseolus vulgaris
Phvul.005G113600 10.0kb upstream 10.0kb upstream 14742 true Chr05: 34329221-34343962 Phaseolus vulgaris
Phvul.005G113600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34329221-34339220 Phaseolus vulgaris
Phvul.005G113600 10.0kb downstream 10.0kb downstream 14742 true Chr05: 34339221-34353962 Phaseolus vulgaris
Phvul.005G113600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34343963-34353962 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306090 5265 Fabidae View MSA
124068410 5270 Rosid View MSA
123738995 5271 Pentapetalae View MSA
122796111 5272 Eudicot View MSA
122047341 5273 Angiosperm View MSA
121350809 5274 Embryophyte View MSA
123425554 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.5856 0.0 90.7045    
cufflinks 26.201 0.0 83.8244    
cufflinks 25.4663 0.0 81.2439    
cufflinks 57.5334 0.0 185.274 High High
cufflinks 27.6659 0.0 88.0574    
cufflinks 25.589 0.0 81.7869    
cufflinks 29.0074 0.0 92.2032 High  
cufflinks 27.1648 0.0 86.3772    
cufflinks 39.7813 0.0 126.283 High High
cufflinks 31.3807 0.0 99.0523    
cufflinks 30.2376 0.0 95.9858    

0 Strain