Gene : Phvul.007G254000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR27002:SF42 - G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 Genomic Order:  2395
Name:  ? Phvul.007G254000 Secondary Identifier:  ? PAC:37166957
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G254000 0.5kb upstream 0.5kb upstream 3531 true Chr07: 37573277-37576807 Phaseolus vulgaris
Phvul.007G254000 0.5kb upstream 0.5kb upstream 500 false Chr07: 37576308-37576807 Phaseolus vulgaris
Phvul.007G254000 0.5kb downstream 0.5kb downstream 3531 true Chr07: 37572777-37576307 Phaseolus vulgaris
Phvul.007G254000 0.5kb downstream 0.5kb downstream 500 false Chr07: 37572777-37573276 Phaseolus vulgaris
Phvul.007G254000 1.0kb upstream 1.0kb upstream 4031 true Chr07: 37573277-37577307 Phaseolus vulgaris
Phvul.007G254000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37576308-37577307 Phaseolus vulgaris
Phvul.007G254000 1.0kb downstream 1.0kb downstream 4031 true Chr07: 37572277-37576307 Phaseolus vulgaris
Phvul.007G254000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37572277-37573276 Phaseolus vulgaris
Phvul.007G254000 2.0kb upstream 2.0kb upstream 5031 true Chr07: 37573277-37578307 Phaseolus vulgaris
Phvul.007G254000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37576308-37578307 Phaseolus vulgaris
Phvul.007G254000 2.0kb downstream 2.0kb downstream 5031 true Chr07: 37571277-37576307 Phaseolus vulgaris
Phvul.007G254000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37571277-37573276 Phaseolus vulgaris
Phvul.007G254000 5.0kb upstream 5.0kb upstream 8031 true Chr07: 37573277-37581307 Phaseolus vulgaris
Phvul.007G254000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37576308-37581307 Phaseolus vulgaris
Phvul.007G254000 5.0kb downstream 5.0kb downstream 8031 true Chr07: 37568277-37576307 Phaseolus vulgaris
Phvul.007G254000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37568277-37573276 Phaseolus vulgaris
Phvul.007G254000 10.0kb upstream 10.0kb upstream 13031 true Chr07: 37573277-37586307 Phaseolus vulgaris
Phvul.007G254000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37576308-37586307 Phaseolus vulgaris
Phvul.007G254000 10.0kb downstream 10.0kb downstream 13031 true Chr07: 37563277-37576307 Phaseolus vulgaris
Phvul.007G254000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37563277-37573276 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310388 5265 Fabidae View MSA
124064956 5270 Rosid View MSA
123738478 5271 Pentapetalae View MSA
122790602 5272 Eudicot View MSA
122050029 5273 Angiosperm View MSA
121311695 5274 Embryophyte View MSA
123348958 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.0675 0.0 6.548   Low
cufflinks 11.6834 0.0 38.365   High
cufflinks 3.8184 0.0 13.2302    
cufflinks 2.93735 0.0 11.3719    
cufflinks 5.34755 0.0 20.1709    
cufflinks 6.72013 0.0 24.3374    
cufflinks 5.63007 0.0 17.7789    
cufflinks 13.3177 0.0 43.2569   High
cufflinks 3.9716 0.0 16.1173    
cufflinks 1.68835 0.0 7.32471   Low
cufflinks 6.79553 0.0 24.4827    

0 Strain