Gene : Phvul.007G254100 P. vulgaris v2.1
Defline:  (1 of 4) PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) Genomic Order:  2396
Name:  ? Phvul.007G254100 Secondary Identifier:  ? PAC:37165109
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G254100 0.5kb upstream 0.5kb upstream 4600 true Chr07: 37598074-37602673 Phaseolus vulgaris
Phvul.007G254100 0.5kb upstream 0.5kb upstream 500 false Chr07: 37598074-37598573 Phaseolus vulgaris
Phvul.007G254100 0.5kb downstream 0.5kb downstream 4600 true Chr07: 37598574-37603173 Phaseolus vulgaris
Phvul.007G254100 0.5kb downstream 0.5kb downstream 500 false Chr07: 37602674-37603173 Phaseolus vulgaris
Phvul.007G254100 1.0kb upstream 1.0kb upstream 5100 true Chr07: 37597574-37602673 Phaseolus vulgaris
Phvul.007G254100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37597574-37598573 Phaseolus vulgaris
Phvul.007G254100 1.0kb downstream 1.0kb downstream 5100 true Chr07: 37598574-37603673 Phaseolus vulgaris
Phvul.007G254100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37602674-37603673 Phaseolus vulgaris
Phvul.007G254100 2.0kb upstream 2.0kb upstream 6100 true Chr07: 37596574-37602673 Phaseolus vulgaris
Phvul.007G254100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37596574-37598573 Phaseolus vulgaris
Phvul.007G254100 2.0kb downstream 2.0kb downstream 6100 true Chr07: 37598574-37604673 Phaseolus vulgaris
Phvul.007G254100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37602674-37604673 Phaseolus vulgaris
Phvul.007G254100 5.0kb upstream 5.0kb upstream 9100 true Chr07: 37593574-37602673 Phaseolus vulgaris
Phvul.007G254100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37593574-37598573 Phaseolus vulgaris
Phvul.007G254100 5.0kb downstream 5.0kb downstream 9100 true Chr07: 37598574-37607673 Phaseolus vulgaris
Phvul.007G254100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37602674-37607673 Phaseolus vulgaris
Phvul.007G254100 10.0kb upstream 10.0kb upstream 14100 true Chr07: 37588574-37602673 Phaseolus vulgaris
Phvul.007G254100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37588574-37598573 Phaseolus vulgaris
Phvul.007G254100 10.0kb downstream 10.0kb downstream 14100 true Chr07: 37598574-37612673 Phaseolus vulgaris
Phvul.007G254100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37602674-37612673 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314270 5265 Fabidae View MSA
124070984 5270 Rosid View MSA
123746400 5271 Pentapetalae View MSA
122787606 5272 Eudicot View MSA
122046013 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.291 0.0 44.707    
cufflinks 14.9971 0.0 38.7755    
cufflinks 11.42 0.0 29.6506   Low
cufflinks 17.1053 0.0 44.2163    
cufflinks 19.8088 0.0 51.2795    
cufflinks 12.4819 0.0 32.3619   Low
cufflinks 17.9873 0.0 46.515    
cufflinks 15.8792 0.0 41.0448    
cufflinks 21.3504 0.0 55.3327    
cufflinks 27.7149 0.0 72.6111   High
cufflinks 16.1465 0.0 41.7379    

0 Strain