Gene : Phvul.005G114300 P. vulgaris v2.1
Defline:  (1 of 55) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  1143
Name:  ? Phvul.005G114300 Secondary Identifier:  ? PAC:37153634
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G114300 0.5kb upstream 0.5kb upstream 1061 true Chr05: 34456588-34457648 Phaseolus vulgaris
Phvul.005G114300 0.5kb upstream 0.5kb upstream 500 false Chr05: 34456588-34457087 Phaseolus vulgaris
Phvul.005G114300 0.5kb downstream 0.5kb downstream 1061 true Chr05: 34457088-34458148 Phaseolus vulgaris
Phvul.005G114300 0.5kb downstream 0.5kb downstream 500 false Chr05: 34457649-34458148 Phaseolus vulgaris
Phvul.005G114300 1.0kb upstream 1.0kb upstream 1561 true Chr05: 34456088-34457648 Phaseolus vulgaris
Phvul.005G114300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34456088-34457087 Phaseolus vulgaris
Phvul.005G114300 1.0kb downstream 1.0kb downstream 1561 true Chr05: 34457088-34458648 Phaseolus vulgaris
Phvul.005G114300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34457649-34458648 Phaseolus vulgaris
Phvul.005G114300 2.0kb upstream 2.0kb upstream 2561 true Chr05: 34455088-34457648 Phaseolus vulgaris
Phvul.005G114300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34455088-34457087 Phaseolus vulgaris
Phvul.005G114300 2.0kb downstream 2.0kb downstream 2561 true Chr05: 34457088-34459648 Phaseolus vulgaris
Phvul.005G114300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34457649-34459648 Phaseolus vulgaris
Phvul.005G114300 5.0kb upstream 5.0kb upstream 5561 true Chr05: 34452088-34457648 Phaseolus vulgaris
Phvul.005G114300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34452088-34457087 Phaseolus vulgaris
Phvul.005G114300 5.0kb downstream 5.0kb downstream 5561 true Chr05: 34457088-34462648 Phaseolus vulgaris
Phvul.005G114300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34457649-34462648 Phaseolus vulgaris
Phvul.005G114300 10.0kb upstream 10.0kb upstream 10561 true Chr05: 34447088-34457648 Phaseolus vulgaris
Phvul.005G114300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34447088-34457087 Phaseolus vulgaris
Phvul.005G114300 10.0kb downstream 10.0kb downstream 10561 true Chr05: 34457088-34467648 Phaseolus vulgaris
Phvul.005G114300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34457649-34467648 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302269 5265 Fabidae View MSA
124050602 5270 Rosid View MSA
123743309 5271 Pentapetalae View MSA
122795927 5272 Eudicot View MSA
122049772 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0835598 0.0 0.41735 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0972178 0.0 0.476126 Low  
cufflinks 0.0722072 0.0 0.365603 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.095697 0.0 0.472363 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain