Gene : Phvul.005G113000 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10811//PTHR10811:SF19 - FRINGE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1130
Name:  ? Phvul.005G113000 Secondary Identifier:  ? PAC:37153357
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G113000 0.5kb upstream 0.5kb upstream 2521 true Chr05: 34286982-34289502 Phaseolus vulgaris
Phvul.005G113000 0.5kb upstream 0.5kb upstream 500 false Chr05: 34289003-34289502 Phaseolus vulgaris
Phvul.005G113000 0.5kb downstream 0.5kb downstream 2521 true Chr05: 34286482-34289002 Phaseolus vulgaris
Phvul.005G113000 0.5kb downstream 0.5kb downstream 500 false Chr05: 34286482-34286981 Phaseolus vulgaris
Phvul.005G113000 1.0kb upstream 1.0kb upstream 3021 true Chr05: 34286982-34290002 Phaseolus vulgaris
Phvul.005G113000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34289003-34290002 Phaseolus vulgaris
Phvul.005G113000 1.0kb downstream 1.0kb downstream 3021 true Chr05: 34285982-34289002 Phaseolus vulgaris
Phvul.005G113000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34285982-34286981 Phaseolus vulgaris
Phvul.005G113000 2.0kb upstream 2.0kb upstream 4021 true Chr05: 34286982-34291002 Phaseolus vulgaris
Phvul.005G113000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34289003-34291002 Phaseolus vulgaris
Phvul.005G113000 2.0kb downstream 2.0kb downstream 4021 true Chr05: 34284982-34289002 Phaseolus vulgaris
Phvul.005G113000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34284982-34286981 Phaseolus vulgaris
Phvul.005G113000 5.0kb upstream 5.0kb upstream 7021 true Chr05: 34286982-34294002 Phaseolus vulgaris
Phvul.005G113000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34289003-34294002 Phaseolus vulgaris
Phvul.005G113000 5.0kb downstream 5.0kb downstream 7021 true Chr05: 34281982-34289002 Phaseolus vulgaris
Phvul.005G113000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34281982-34286981 Phaseolus vulgaris
Phvul.005G113000 10.0kb upstream 10.0kb upstream 12021 true Chr05: 34286982-34299002 Phaseolus vulgaris
Phvul.005G113000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34289003-34299002 Phaseolus vulgaris
Phvul.005G113000 10.0kb downstream 10.0kb downstream 12021 true Chr05: 34276982-34289002 Phaseolus vulgaris
Phvul.005G113000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34276982-34286981 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298025 5265 Fabidae View MSA
124041698 5270 Rosid View MSA
123647558 5271 Pentapetalae View MSA
122681526 5272 Eudicot View MSA
122048571 5273 Angiosperm View MSA
121350591 5274 Embryophyte View MSA
123381812 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0245213 0.0 0.121528 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0412377 0.0 0.192609 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.125931 0.0 0.52932 Low  
cufflinks 0.441164 0.0 1.67894 Low  
cufflinks 0.235433 0.0 0.937919 Low  
cufflinks 1.55507 0.0 5.26596   High
cufflinks 0.0259558 0.0 0.128118 Low Low
cufflinks 0.076768 0.0 0.339644 Low  

0 Strain