Gene : Phvul.005G113400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10783:SF46 - EXS (ERD1/XPR1/SYG1) DOMAIN PROTEIN-RELATED Genomic Order:  1134
Name:  ? Phvul.005G113400 Secondary Identifier:  ? PAC:37153042
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G113400 0.5kb upstream 0.5kb upstream 8649 true Chr05: 34325901-34334549 Phaseolus vulgaris
Phvul.005G113400 0.5kb upstream 0.5kb upstream 500 false Chr05: 34325901-34326400 Phaseolus vulgaris
Phvul.005G113400 0.5kb downstream 0.5kb downstream 8649 true Chr05: 34326401-34335049 Phaseolus vulgaris
Phvul.005G113400 0.5kb downstream 0.5kb downstream 500 false Chr05: 34334550-34335049 Phaseolus vulgaris
Phvul.005G113400 1.0kb upstream 1.0kb upstream 9149 true Chr05: 34325401-34334549 Phaseolus vulgaris
Phvul.005G113400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34325401-34326400 Phaseolus vulgaris
Phvul.005G113400 1.0kb downstream 1.0kb downstream 9149 true Chr05: 34326401-34335549 Phaseolus vulgaris
Phvul.005G113400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34334550-34335549 Phaseolus vulgaris
Phvul.005G113400 2.0kb upstream 2.0kb upstream 10149 true Chr05: 34324401-34334549 Phaseolus vulgaris
Phvul.005G113400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34324401-34326400 Phaseolus vulgaris
Phvul.005G113400 2.0kb downstream 2.0kb downstream 10149 true Chr05: 34326401-34336549 Phaseolus vulgaris
Phvul.005G113400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34334550-34336549 Phaseolus vulgaris
Phvul.005G113400 5.0kb upstream 5.0kb upstream 13149 true Chr05: 34321401-34334549 Phaseolus vulgaris
Phvul.005G113400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34321401-34326400 Phaseolus vulgaris
Phvul.005G113400 5.0kb downstream 5.0kb downstream 13149 true Chr05: 34326401-34339549 Phaseolus vulgaris
Phvul.005G113400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34334550-34339549 Phaseolus vulgaris
Phvul.005G113400 10.0kb upstream 10.0kb upstream 18149 true Chr05: 34316401-34334549 Phaseolus vulgaris
Phvul.005G113400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34316401-34326400 Phaseolus vulgaris
Phvul.005G113400 10.0kb downstream 10.0kb downstream 18149 true Chr05: 34326401-34344549 Phaseolus vulgaris
Phvul.005G113400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34334550-34344549 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300819 5265 Fabidae View MSA
124063910 5270 Rosid View MSA
123749394 5271 Pentapetalae View MSA
122792287 5272 Eudicot View MSA
122045610 5273 Angiosperm View MSA
121348290 5274 Embryophyte View MSA
123424613 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6605 0.0 28.6685    
cufflinks 9.44972 0.0 25.7467    
cufflinks 10.7229 0.0 28.8577    
cufflinks 16.6699 0.0 43.7339   High
cufflinks 13.2824 0.0 35.3481   High
cufflinks 8.62594 0.0 23.6845   Low
cufflinks 8.92502 0.0 24.4833   Low
cufflinks 10.9034 0.0 29.3381    
cufflinks 10.5173 0.0 28.5042    
cufflinks 10.4699 0.0 28.2814    
cufflinks 11.7115 0.0 31.4498    

0 Strain