Gene : Phvul.005G113500 P. vulgaris v2.1
Defline:  (1 of 3) PTHR15615:SF20 - CYCLIN FAMILY PROTEIN-RELATED Genomic Order:  1135
Name:  ? Phvul.005G113500 Secondary Identifier:  ? PAC:37154290
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G113500 0.5kb upstream 0.5kb upstream 2335 true Chr05: 34334296-34336630 Phaseolus vulgaris
Phvul.005G113500 0.5kb upstream 0.5kb upstream 500 false Chr05: 34334296-34334795 Phaseolus vulgaris
Phvul.005G113500 0.5kb downstream 0.5kb downstream 2335 true Chr05: 34334796-34337130 Phaseolus vulgaris
Phvul.005G113500 0.5kb downstream 0.5kb downstream 500 false Chr05: 34336631-34337130 Phaseolus vulgaris
Phvul.005G113500 1.0kb upstream 1.0kb upstream 2835 true Chr05: 34333796-34336630 Phaseolus vulgaris
Phvul.005G113500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34333796-34334795 Phaseolus vulgaris
Phvul.005G113500 1.0kb downstream 1.0kb downstream 2835 true Chr05: 34334796-34337630 Phaseolus vulgaris
Phvul.005G113500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34336631-34337630 Phaseolus vulgaris
Phvul.005G113500 2.0kb upstream 2.0kb upstream 3835 true Chr05: 34332796-34336630 Phaseolus vulgaris
Phvul.005G113500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34332796-34334795 Phaseolus vulgaris
Phvul.005G113500 2.0kb downstream 2.0kb downstream 3835 true Chr05: 34334796-34338630 Phaseolus vulgaris
Phvul.005G113500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34336631-34338630 Phaseolus vulgaris
Phvul.005G113500 5.0kb upstream 5.0kb upstream 6835 true Chr05: 34329796-34336630 Phaseolus vulgaris
Phvul.005G113500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34329796-34334795 Phaseolus vulgaris
Phvul.005G113500 5.0kb downstream 5.0kb downstream 6835 true Chr05: 34334796-34341630 Phaseolus vulgaris
Phvul.005G113500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34336631-34341630 Phaseolus vulgaris
Phvul.005G113500 10.0kb upstream 10.0kb upstream 11835 true Chr05: 34324796-34336630 Phaseolus vulgaris
Phvul.005G113500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34324796-34334795 Phaseolus vulgaris
Phvul.005G113500 10.0kb downstream 10.0kb downstream 11835 true Chr05: 34334796-34346630 Phaseolus vulgaris
Phvul.005G113500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34336631-34346630 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307160 5265 Fabidae View MSA
124063434 5270 Rosid View MSA
123737753 5271 Pentapetalae View MSA
122787921 5272 Eudicot View MSA
122045921 5273 Angiosperm View MSA
121349638 5274 Embryophyte View MSA
123428486 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.33205 0.0 4.57492    
cufflinks 3.01814 0.0 9.45952    
cufflinks 10.8419 0.0 29.639   High
cufflinks 7.87949 0.0 22.2825    
cufflinks 0.783469 0.0 2.84248    
cufflinks 14.7991 0.0 39.4929   High
cufflinks 0.569913 0.0 2.12116   Low
cufflinks 2.66712 0.0 8.43689    
cufflinks 0.356937 0.0 1.38132 Low Low
cufflinks 4.75874 0.0 14.1701    
cufflinks 0.787193 0.0 2.86113    

0 Strain