Gene : Phvul.007G257000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12419//PTHR12419:SF25 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2427
Name:  ? Phvul.007G257000 Secondary Identifier:  ? PAC:37166376
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G257000 0.5kb upstream 0.5kb upstream 4772 true Chr07: 37856487-37861258 Phaseolus vulgaris
Phvul.007G257000 0.5kb upstream 0.5kb upstream 500 false Chr07: 37856487-37856986 Phaseolus vulgaris
Phvul.007G257000 0.5kb downstream 0.5kb downstream 4772 true Chr07: 37856987-37861758 Phaseolus vulgaris
Phvul.007G257000 0.5kb downstream 0.5kb downstream 500 false Chr07: 37861259-37861758 Phaseolus vulgaris
Phvul.007G257000 1.0kb upstream 1.0kb upstream 5272 true Chr07: 37855987-37861258 Phaseolus vulgaris
Phvul.007G257000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37855987-37856986 Phaseolus vulgaris
Phvul.007G257000 1.0kb downstream 1.0kb downstream 5272 true Chr07: 37856987-37862258 Phaseolus vulgaris
Phvul.007G257000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37861259-37862258 Phaseolus vulgaris
Phvul.007G257000 2.0kb upstream 2.0kb upstream 6272 true Chr07: 37854987-37861258 Phaseolus vulgaris
Phvul.007G257000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37854987-37856986 Phaseolus vulgaris
Phvul.007G257000 2.0kb downstream 2.0kb downstream 6272 true Chr07: 37856987-37863258 Phaseolus vulgaris
Phvul.007G257000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37861259-37863258 Phaseolus vulgaris
Phvul.007G257000 5.0kb upstream 5.0kb upstream 9272 true Chr07: 37851987-37861258 Phaseolus vulgaris
Phvul.007G257000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37851987-37856986 Phaseolus vulgaris
Phvul.007G257000 5.0kb downstream 5.0kb downstream 9272 true Chr07: 37856987-37866258 Phaseolus vulgaris
Phvul.007G257000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37861259-37866258 Phaseolus vulgaris
Phvul.007G257000 10.0kb upstream 10.0kb upstream 14272 true Chr07: 37846987-37861258 Phaseolus vulgaris
Phvul.007G257000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37846987-37856986 Phaseolus vulgaris
Phvul.007G257000 10.0kb downstream 10.0kb downstream 14272 true Chr07: 37856987-37871258 Phaseolus vulgaris
Phvul.007G257000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37861259-37871258 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074941 5270 Rosid View MSA
122307233 5265 Fabidae View MSA
123749661 5271 Pentapetalae View MSA
122794711 5272 Eudicot View MSA
122048756 5273 Angiosperm View MSA
121349238 5274 Embryophyte View MSA
123428485 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.77998 0.0 26.606    
cufflinks 8.25699 0.0 22.8557    
cufflinks 19.5424 0.0 50.7992   High
cufflinks 11.2002 0.0 30.4002    
cufflinks 7.51125 0.0 21.0724    
cufflinks 9.90524 0.0 26.948    
cufflinks 5.19195 0.0 15.0309   Low
cufflinks 6.66285 0.0 18.7    
cufflinks 4.87051 0.0 14.2632   Low
cufflinks 6.98844 0.0 19.6209    
cufflinks 7.12344 0.0 20.0573    

0 Strain