Gene : Phvul.007G256500 P. vulgaris v2.1
Defline:  (1 of 5) PTHR22950:SF269 - EXPRESSED PROTEIN Genomic Order:  2422
Name:  ? Phvul.007G256500 Secondary Identifier:  ? PAC:37164629
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G256500 0.5kb upstream 0.5kb upstream 6925 true Chr07: 37801774-37808698 Phaseolus vulgaris
Phvul.007G256500 0.5kb upstream 0.5kb upstream 500 false Chr07: 37808199-37808698 Phaseolus vulgaris
Phvul.007G256500 0.5kb downstream 0.5kb downstream 6925 true Chr07: 37801274-37808198 Phaseolus vulgaris
Phvul.007G256500 0.5kb downstream 0.5kb downstream 500 false Chr07: 37801274-37801773 Phaseolus vulgaris
Phvul.007G256500 1.0kb upstream 1.0kb upstream 7425 true Chr07: 37801774-37809198 Phaseolus vulgaris
Phvul.007G256500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37808199-37809198 Phaseolus vulgaris
Phvul.007G256500 1.0kb downstream 1.0kb downstream 7425 true Chr07: 37800774-37808198 Phaseolus vulgaris
Phvul.007G256500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37800774-37801773 Phaseolus vulgaris
Phvul.007G256500 2.0kb upstream 2.0kb upstream 8425 true Chr07: 37801774-37810198 Phaseolus vulgaris
Phvul.007G256500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37808199-37810198 Phaseolus vulgaris
Phvul.007G256500 2.0kb downstream 2.0kb downstream 8425 true Chr07: 37799774-37808198 Phaseolus vulgaris
Phvul.007G256500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37799774-37801773 Phaseolus vulgaris
Phvul.007G256500 5.0kb upstream 5.0kb upstream 11425 true Chr07: 37801774-37813198 Phaseolus vulgaris
Phvul.007G256500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37808199-37813198 Phaseolus vulgaris
Phvul.007G256500 5.0kb downstream 5.0kb downstream 11425 true Chr07: 37796774-37808198 Phaseolus vulgaris
Phvul.007G256500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37796774-37801773 Phaseolus vulgaris
Phvul.007G256500 10.0kb upstream 10.0kb upstream 16425 true Chr07: 37801774-37818198 Phaseolus vulgaris
Phvul.007G256500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37808199-37818198 Phaseolus vulgaris
Phvul.007G256500 10.0kb downstream 10.0kb downstream 16425 true Chr07: 37791774-37808198 Phaseolus vulgaris
Phvul.007G256500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37791774-37801773 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314721 5265 Fabidae View MSA
124067158 5270 Rosid View MSA
123753416 5271 Pentapetalae View MSA
122789059 5272 Eudicot View MSA
122047534 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121351519 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.64174 0.0 26.3275    
cufflinks 3.62547 0.0 10.9501    
cufflinks 18.2073 0.0 47.4934    
cufflinks 41.8701 0.0 108.661 High High
cufflinks 11.0016 0.0 29.8025    
cufflinks 9.47618 0.0 25.9578    
cufflinks 2.37157 0.0 7.54673   Low
cufflinks 2.70328 0.0 8.44471   Low
cufflinks 5.07262 0.0 14.837    
cufflinks 8.95884 0.0 24.6552    
cufflinks 12.9529 0.0 34.6885    

0 Strain