Gene : Phvul.007G257900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR14894 - CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3 Genomic Order:  2436
Name:  ? Phvul.007G257900 Secondary Identifier:  ? PAC:37166402
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G257900 0.5kb upstream 0.5kb upstream 5652 true Chr07: 37960034-37965685 Phaseolus vulgaris
Phvul.007G257900 0.5kb upstream 0.5kb upstream 500 false Chr07: 37960034-37960533 Phaseolus vulgaris
Phvul.007G257900 0.5kb downstream 0.5kb downstream 5652 true Chr07: 37960534-37966185 Phaseolus vulgaris
Phvul.007G257900 0.5kb downstream 0.5kb downstream 500 false Chr07: 37965686-37966185 Phaseolus vulgaris
Phvul.007G257900 1.0kb upstream 1.0kb upstream 6152 true Chr07: 37959534-37965685 Phaseolus vulgaris
Phvul.007G257900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37959534-37960533 Phaseolus vulgaris
Phvul.007G257900 1.0kb downstream 1.0kb downstream 6152 true Chr07: 37960534-37966685 Phaseolus vulgaris
Phvul.007G257900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37965686-37966685 Phaseolus vulgaris
Phvul.007G257900 2.0kb upstream 2.0kb upstream 7152 true Chr07: 37958534-37965685 Phaseolus vulgaris
Phvul.007G257900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37958534-37960533 Phaseolus vulgaris
Phvul.007G257900 2.0kb downstream 2.0kb downstream 7152 true Chr07: 37960534-37967685 Phaseolus vulgaris
Phvul.007G257900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37965686-37967685 Phaseolus vulgaris
Phvul.007G257900 5.0kb upstream 5.0kb upstream 10152 true Chr07: 37955534-37965685 Phaseolus vulgaris
Phvul.007G257900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37955534-37960533 Phaseolus vulgaris
Phvul.007G257900 5.0kb downstream 5.0kb downstream 10152 true Chr07: 37960534-37970685 Phaseolus vulgaris
Phvul.007G257900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37965686-37970685 Phaseolus vulgaris
Phvul.007G257900 10.0kb upstream 10.0kb upstream 15152 true Chr07: 37950534-37965685 Phaseolus vulgaris
Phvul.007G257900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37950534-37960533 Phaseolus vulgaris
Phvul.007G257900 10.0kb downstream 10.0kb downstream 15152 true Chr07: 37960534-37975685 Phaseolus vulgaris
Phvul.007G257900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37965686-37975685 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305560 5265 Fabidae View MSA
124066574 5270 Rosid View MSA
123736525 5271 Pentapetalae View MSA
122787291 5272 Eudicot View MSA
122046505 5273 Angiosperm View MSA
121347618 5274 Embryophyte View MSA
123424733 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0468 0.0 26.3514   Low
cufflinks 10.3272 0.0 27.1087    
cufflinks 12.7308 0.0 33.0929    
cufflinks 11.1625 0.0 29.3001    
cufflinks 11.4497 0.0 29.9886    
cufflinks 10.2956 0.0 27.0276    
cufflinks 10.5757 0.0 27.7346    
cufflinks 15.2352 0.0 39.4199   High
cufflinks 11.7579 0.0 30.6973    
cufflinks 14.7199 0.0 38.1291   High
cufflinks 12.3409 0.0 32.1892    

0 Strain