Gene : Phvul.007G257200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24073:SF578 - RAS-RELATED PROTEIN RABA4D Genomic Order:  2429
Name:  ? Phvul.007G257200 Secondary Identifier:  ? PAC:37166978
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G257200 0.5kb upstream 0.5kb upstream 3014 true Chr07: 37874364-37877377 Phaseolus vulgaris
Phvul.007G257200 0.5kb upstream 0.5kb upstream 500 false Chr07: 37874364-37874863 Phaseolus vulgaris
Phvul.007G257200 0.5kb downstream 0.5kb downstream 3014 true Chr07: 37874864-37877877 Phaseolus vulgaris
Phvul.007G257200 0.5kb downstream 0.5kb downstream 500 false Chr07: 37877378-37877877 Phaseolus vulgaris
Phvul.007G257200 1.0kb upstream 1.0kb upstream 3514 true Chr07: 37873864-37877377 Phaseolus vulgaris
Phvul.007G257200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37873864-37874863 Phaseolus vulgaris
Phvul.007G257200 1.0kb downstream 1.0kb downstream 3514 true Chr07: 37874864-37878377 Phaseolus vulgaris
Phvul.007G257200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37877378-37878377 Phaseolus vulgaris
Phvul.007G257200 2.0kb upstream 2.0kb upstream 4514 true Chr07: 37872864-37877377 Phaseolus vulgaris
Phvul.007G257200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37872864-37874863 Phaseolus vulgaris
Phvul.007G257200 2.0kb downstream 2.0kb downstream 4514 true Chr07: 37874864-37879377 Phaseolus vulgaris
Phvul.007G257200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37877378-37879377 Phaseolus vulgaris
Phvul.007G257200 5.0kb upstream 5.0kb upstream 7514 true Chr07: 37869864-37877377 Phaseolus vulgaris
Phvul.007G257200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37869864-37874863 Phaseolus vulgaris
Phvul.007G257200 5.0kb downstream 5.0kb downstream 7514 true Chr07: 37874864-37882377 Phaseolus vulgaris
Phvul.007G257200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37877378-37882377 Phaseolus vulgaris
Phvul.007G257200 10.0kb upstream 10.0kb upstream 12514 true Chr07: 37864864-37877377 Phaseolus vulgaris
Phvul.007G257200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37864864-37874863 Phaseolus vulgaris
Phvul.007G257200 10.0kb downstream 10.0kb downstream 12514 true Chr07: 37874864-37887377 Phaseolus vulgaris
Phvul.007G257200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37877378-37887377 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314261 5265 Fabidae View MSA
124065082 5270 Rosid View MSA
123746606 5271 Pentapetalae View MSA
122786113 5272 Eudicot View MSA
122041554 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.5885 0.0 58.8797   High
cufflinks 4.33068 0.0 13.0801    
cufflinks 0.964093 0.0 3.44919   Low
cufflinks 6.55353 0.0 18.8222    
cufflinks 7.11841 0.0 20.4004    
cufflinks 2.592 0.0 8.30941   Low
cufflinks 9.07935 0.0 25.3054    
cufflinks 10.6583 0.0 29.3102    
cufflinks 13.3986 0.0 36.0971    
cufflinks 10.89 0.0 29.9272    
cufflinks 6.5775 0.0 18.9683    

0 Strain