Gene : Phvul.007G255400 P. vulgaris v2.1
Defline:  (1 of 1) K02999 - DNA-directed RNA polymerase I subunit RPA1 (RPA1, POLR1A) Genomic Order:  2411
Name:  ? Phvul.007G255400 Secondary Identifier:  ? PAC:37166598
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G255400 0.5kb upstream 0.5kb upstream 13176 true Chr07: 37696945-37710120 Phaseolus vulgaris
Phvul.007G255400 0.5kb upstream 0.5kb upstream 500 false Chr07: 37696945-37697444 Phaseolus vulgaris
Phvul.007G255400 0.5kb downstream 0.5kb downstream 13176 true Chr07: 37697445-37710620 Phaseolus vulgaris
Phvul.007G255400 0.5kb downstream 0.5kb downstream 500 false Chr07: 37710121-37710620 Phaseolus vulgaris
Phvul.007G255400 1.0kb upstream 1.0kb upstream 13676 true Chr07: 37696445-37710120 Phaseolus vulgaris
Phvul.007G255400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37696445-37697444 Phaseolus vulgaris
Phvul.007G255400 1.0kb downstream 1.0kb downstream 13676 true Chr07: 37697445-37711120 Phaseolus vulgaris
Phvul.007G255400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37710121-37711120 Phaseolus vulgaris
Phvul.007G255400 2.0kb upstream 2.0kb upstream 14676 true Chr07: 37695445-37710120 Phaseolus vulgaris
Phvul.007G255400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37695445-37697444 Phaseolus vulgaris
Phvul.007G255400 2.0kb downstream 2.0kb downstream 14676 true Chr07: 37697445-37712120 Phaseolus vulgaris
Phvul.007G255400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37710121-37712120 Phaseolus vulgaris
Phvul.007G255400 5.0kb upstream 5.0kb upstream 17676 true Chr07: 37692445-37710120 Phaseolus vulgaris
Phvul.007G255400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37692445-37697444 Phaseolus vulgaris
Phvul.007G255400 5.0kb downstream 5.0kb downstream 17676 true Chr07: 37697445-37715120 Phaseolus vulgaris
Phvul.007G255400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37710121-37715120 Phaseolus vulgaris
Phvul.007G255400 10.0kb upstream 10.0kb upstream 22676 true Chr07: 37687445-37710120 Phaseolus vulgaris
Phvul.007G255400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37687445-37697444 Phaseolus vulgaris
Phvul.007G255400 10.0kb downstream 10.0kb downstream 22676 true Chr07: 37697445-37720120 Phaseolus vulgaris
Phvul.007G255400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37710121-37720120 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308558 5265 Fabidae View MSA
124068682 5270 Rosid View MSA
123740783 5271 Pentapetalae View MSA
122786544 5272 Eudicot View MSA
122045680 5273 Angiosperm View MSA
121344248 5274 Embryophyte View MSA
123424891 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.5234 0.0 4.37473   Low
cufflinks 5.79372 0.0 15.0568    
cufflinks 6.25641 0.0 16.2135    
cufflinks 1.70363 0.0 4.90014   Low
cufflinks 4.88283 0.0 12.8359    
cufflinks 5.18906 0.0 13.536    
cufflinks 7.30752 0.0 18.901    
cufflinks 8.91996 0.0 23.0788    
cufflinks 8.01019 0.0 20.7075    
cufflinks 9.5816 0.0 24.7902   High
cufflinks 3.23082 0.0 8.73626    

0 Strain