Gene : Phvul.007G255600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR32060:SF5 - PEPTIDASE S41 FAMILY PROTEIN Genomic Order:  2413
Name:  ? Phvul.007G255600 Secondary Identifier:  ? PAC:37165261
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G255600 0.5kb upstream 0.5kb upstream 5886 true Chr07: 37747686-37753571 Phaseolus vulgaris
Phvul.007G255600 0.5kb upstream 0.5kb upstream 500 false Chr07: 37747686-37748185 Phaseolus vulgaris
Phvul.007G255600 0.5kb downstream 0.5kb downstream 5886 true Chr07: 37748186-37754071 Phaseolus vulgaris
Phvul.007G255600 0.5kb downstream 0.5kb downstream 500 false Chr07: 37753572-37754071 Phaseolus vulgaris
Phvul.007G255600 1.0kb upstream 1.0kb upstream 6386 true Chr07: 37747186-37753571 Phaseolus vulgaris
Phvul.007G255600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37747186-37748185 Phaseolus vulgaris
Phvul.007G255600 1.0kb downstream 1.0kb downstream 6386 true Chr07: 37748186-37754571 Phaseolus vulgaris
Phvul.007G255600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37753572-37754571 Phaseolus vulgaris
Phvul.007G255600 2.0kb upstream 2.0kb upstream 7386 true Chr07: 37746186-37753571 Phaseolus vulgaris
Phvul.007G255600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37746186-37748185 Phaseolus vulgaris
Phvul.007G255600 2.0kb downstream 2.0kb downstream 7386 true Chr07: 37748186-37755571 Phaseolus vulgaris
Phvul.007G255600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37753572-37755571 Phaseolus vulgaris
Phvul.007G255600 5.0kb upstream 5.0kb upstream 10386 true Chr07: 37743186-37753571 Phaseolus vulgaris
Phvul.007G255600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37743186-37748185 Phaseolus vulgaris
Phvul.007G255600 5.0kb downstream 5.0kb downstream 10386 true Chr07: 37748186-37758571 Phaseolus vulgaris
Phvul.007G255600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37753572-37758571 Phaseolus vulgaris
Phvul.007G255600 10.0kb upstream 10.0kb upstream 15386 true Chr07: 37738186-37753571 Phaseolus vulgaris
Phvul.007G255600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37738186-37748185 Phaseolus vulgaris
Phvul.007G255600 10.0kb downstream 10.0kb downstream 15386 true Chr07: 37748186-37763571 Phaseolus vulgaris
Phvul.007G255600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37753572-37763571 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307614 5265 Fabidae View MSA
124067305 5270 Rosid View MSA
123750616 5271 Pentapetalae View MSA
122792134 5272 Eudicot View MSA
122042962 5273 Angiosperm View MSA
121346288 5274 Embryophyte View MSA
123424698 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.6559 0.0 147.438 High High
cufflinks 10.7177 0.0 32.2325    
cufflinks 19.8046 0.0 58.4223    
cufflinks 3.03835 0.0 11.4093    
cufflinks 2.38796 0.0 9.4831    
cufflinks 13.315 0.0 39.2043    
cufflinks 0.916507 0.0 4.58998   Low
cufflinks 0.664764 0.0 3.67428   Low
cufflinks 0.400599 0.0 2.49639 Low Low
cufflinks 14.128 0.0 41.9335    
cufflinks 7.15131 0.0 22.0754    

0 Strain