Gene : Phvul.005G115300 P. vulgaris v2.1
Defline:  (1 of 5) PTHR11214:SF5 - BETA-1,3-GALACTOSYLTRANSFERASE 2-RELATED Genomic Order:  1153
Name:  ? Phvul.005G115300 Secondary Identifier:  ? PAC:37153070
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G115300 0.5kb upstream 0.5kb upstream 4810 true Chr05: 34652917-34657726 Phaseolus vulgaris
Phvul.005G115300 0.5kb upstream 0.5kb upstream 500 false Chr05: 34652917-34653416 Phaseolus vulgaris
Phvul.005G115300 0.5kb downstream 0.5kb downstream 4810 true Chr05: 34653417-34658226 Phaseolus vulgaris
Phvul.005G115300 0.5kb downstream 0.5kb downstream 500 false Chr05: 34657727-34658226 Phaseolus vulgaris
Phvul.005G115300 1.0kb upstream 1.0kb upstream 5310 true Chr05: 34652417-34657726 Phaseolus vulgaris
Phvul.005G115300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34652417-34653416 Phaseolus vulgaris
Phvul.005G115300 1.0kb downstream 1.0kb downstream 5310 true Chr05: 34653417-34658726 Phaseolus vulgaris
Phvul.005G115300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34657727-34658726 Phaseolus vulgaris
Phvul.005G115300 2.0kb upstream 2.0kb upstream 6310 true Chr05: 34651417-34657726 Phaseolus vulgaris
Phvul.005G115300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34651417-34653416 Phaseolus vulgaris
Phvul.005G115300 2.0kb downstream 2.0kb downstream 6310 true Chr05: 34653417-34659726 Phaseolus vulgaris
Phvul.005G115300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34657727-34659726 Phaseolus vulgaris
Phvul.005G115300 5.0kb upstream 5.0kb upstream 9310 true Chr05: 34648417-34657726 Phaseolus vulgaris
Phvul.005G115300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34648417-34653416 Phaseolus vulgaris
Phvul.005G115300 5.0kb downstream 5.0kb downstream 9310 true Chr05: 34653417-34662726 Phaseolus vulgaris
Phvul.005G115300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34657727-34662726 Phaseolus vulgaris
Phvul.005G115300 10.0kb upstream 10.0kb upstream 14310 true Chr05: 34643417-34657726 Phaseolus vulgaris
Phvul.005G115300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34643417-34653416 Phaseolus vulgaris
Phvul.005G115300 10.0kb downstream 10.0kb downstream 14310 true Chr05: 34653417-34667726 Phaseolus vulgaris
Phvul.005G115300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34657727-34667726 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309134 5265 Fabidae View MSA
124072370 5270 Rosid View MSA
123747291 5271 Pentapetalae View MSA
122789444 5272 Eudicot View MSA
122042482 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.65013 0.0 13.0499    
cufflinks 3.42004 0.0 9.87592   Low
cufflinks 11.4686 0.0 29.9562    
cufflinks 10.4532 0.0 27.632    
cufflinks 4.51932 0.0 12.8244    
cufflinks 15.4807 0.0 40.0771   High
cufflinks 8.20834 0.0 21.8731    
cufflinks 3.52554 0.0 10.0807   Low
cufflinks 13.204 0.0 34.314   High
cufflinks 6.26916 0.0 17.1562    
cufflinks 7.79112 0.0 20.9839    

0 Strain