Gene : Phvul.005G115500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10641//PTHR10641:SF571 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED Genomic Order:  1155
Name:  ? Phvul.005G115500 Secondary Identifier:  ? PAC:37152788
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G115500 0.5kb upstream 0.5kb upstream 4278 true Chr05: 34728589-34732866 Phaseolus vulgaris
Phvul.005G115500 0.5kb upstream 0.5kb upstream 500 false Chr05: 34732367-34732866 Phaseolus vulgaris
Phvul.005G115500 0.5kb downstream 0.5kb downstream 4278 true Chr05: 34728089-34732366 Phaseolus vulgaris
Phvul.005G115500 0.5kb downstream 0.5kb downstream 500 false Chr05: 34728089-34728588 Phaseolus vulgaris
Phvul.005G115500 1.0kb upstream 1.0kb upstream 4778 true Chr05: 34728589-34733366 Phaseolus vulgaris
Phvul.005G115500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 34732367-34733366 Phaseolus vulgaris
Phvul.005G115500 1.0kb downstream 1.0kb downstream 4778 true Chr05: 34727589-34732366 Phaseolus vulgaris
Phvul.005G115500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 34727589-34728588 Phaseolus vulgaris
Phvul.005G115500 2.0kb upstream 2.0kb upstream 5778 true Chr05: 34728589-34734366 Phaseolus vulgaris
Phvul.005G115500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 34732367-34734366 Phaseolus vulgaris
Phvul.005G115500 2.0kb downstream 2.0kb downstream 5778 true Chr05: 34726589-34732366 Phaseolus vulgaris
Phvul.005G115500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 34726589-34728588 Phaseolus vulgaris
Phvul.005G115500 5.0kb upstream 5.0kb upstream 8778 true Chr05: 34728589-34737366 Phaseolus vulgaris
Phvul.005G115500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 34732367-34737366 Phaseolus vulgaris
Phvul.005G115500 5.0kb downstream 5.0kb downstream 8778 true Chr05: 34723589-34732366 Phaseolus vulgaris
Phvul.005G115500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 34723589-34728588 Phaseolus vulgaris
Phvul.005G115500 10.0kb upstream 10.0kb upstream 13778 true Chr05: 34728589-34742366 Phaseolus vulgaris
Phvul.005G115500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34732367-34742366 Phaseolus vulgaris
Phvul.005G115500 10.0kb downstream 10.0kb downstream 13778 true Chr05: 34718589-34732366 Phaseolus vulgaris
Phvul.005G115500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 34718589-34728588 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301172 5265 Fabidae View MSA
124064748 5270 Rosid View MSA
123751409 5271 Pentapetalae View MSA
122786305 5272 Eudicot View MSA
122048275 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121350966 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.09029 0.0 3.60752    
cufflinks 0.0134237 0.0 0.0670463 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.24895 0.0 4.05836    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain