Gene : Phvul.005G117600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31675:SF2 - AXIAL REGULATOR YABBY 2-RELATED Genomic Order:  1179
Name:  ? Phvul.005G117600 Secondary Identifier:  ? PAC:37154283
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G117600 0.5kb upstream 0.5kb upstream 9479 true Chr05: 35173817-35183295 Phaseolus vulgaris
Phvul.005G117600 0.5kb upstream 0.5kb upstream 500 false Chr05: 35173817-35174316 Phaseolus vulgaris
Phvul.005G117600 0.5kb downstream 0.5kb downstream 9479 true Chr05: 35174317-35183795 Phaseolus vulgaris
Phvul.005G117600 0.5kb downstream 0.5kb downstream 500 false Chr05: 35183296-35183795 Phaseolus vulgaris
Phvul.005G117600 1.0kb upstream 1.0kb upstream 9979 true Chr05: 35173317-35183295 Phaseolus vulgaris
Phvul.005G117600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35173317-35174316 Phaseolus vulgaris
Phvul.005G117600 1.0kb downstream 1.0kb downstream 9979 true Chr05: 35174317-35184295 Phaseolus vulgaris
Phvul.005G117600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35183296-35184295 Phaseolus vulgaris
Phvul.005G117600 2.0kb upstream 2.0kb upstream 10979 true Chr05: 35172317-35183295 Phaseolus vulgaris
Phvul.005G117600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35172317-35174316 Phaseolus vulgaris
Phvul.005G117600 2.0kb downstream 2.0kb downstream 10979 true Chr05: 35174317-35185295 Phaseolus vulgaris
Phvul.005G117600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35183296-35185295 Phaseolus vulgaris
Phvul.005G117600 5.0kb upstream 5.0kb upstream 13979 true Chr05: 35169317-35183295 Phaseolus vulgaris
Phvul.005G117600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35169317-35174316 Phaseolus vulgaris
Phvul.005G117600 5.0kb downstream 5.0kb downstream 13979 true Chr05: 35174317-35188295 Phaseolus vulgaris
Phvul.005G117600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35183296-35188295 Phaseolus vulgaris
Phvul.005G117600 10.0kb upstream 10.0kb upstream 18979 true Chr05: 35164317-35183295 Phaseolus vulgaris
Phvul.005G117600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35164317-35174316 Phaseolus vulgaris
Phvul.005G117600 10.0kb downstream 10.0kb downstream 18979 true Chr05: 35174317-35193295 Phaseolus vulgaris
Phvul.005G117600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35183296-35193295 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310531 5265 Fabidae View MSA
124068097 5270 Rosid View MSA
123746841 5271 Pentapetalae View MSA
122797230 5272 Eudicot View MSA
122048465 5273 Angiosperm View MSA
121349155 5274 Embryophyte View MSA
123426058 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.9315 0.0 72.9998    
cufflinks 35.8107 0.0 139.065 High  
cufflinks 20.4329 0.0 70.2151    
cufflinks 27.0388 0.0 105.22    
cufflinks 6.3931 0.0 29.3653    
cufflinks 16.9768 0.0 79.1    
cufflinks 0.0517058 0.0 0.286764 Low Low
cufflinks 0.0325428 0.0 0.190697 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 20.1348 0.0 91.3032    
cufflinks 7.01228 0.0 31.0147    

0 Strain