Gene : Phvul.007G259500 P. vulgaris v2.1
Defline:  (1 of 2) 1.14.19.6 - Delta(12)-fatty-acid desaturase / Oleoyl-CoA Delta(12) desaturase Genomic Order:  2452
Name:  ? Phvul.007G259500 Secondary Identifier:  ? PAC:37164530
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5995 Phaseolus vulgaris pathologic  
Pvulgaris PWY-762 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G259500 0.5kb upstream 0.5kb upstream 3189 true Chr07: 38098881-38102069 Phaseolus vulgaris
Phvul.007G259500 0.5kb upstream 0.5kb upstream 500 false Chr07: 38098881-38099380 Phaseolus vulgaris
Phvul.007G259500 0.5kb downstream 0.5kb downstream 3189 true Chr07: 38099381-38102569 Phaseolus vulgaris
Phvul.007G259500 0.5kb downstream 0.5kb downstream 500 false Chr07: 38102070-38102569 Phaseolus vulgaris
Phvul.007G259500 1.0kb upstream 1.0kb upstream 3689 true Chr07: 38098381-38102069 Phaseolus vulgaris
Phvul.007G259500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 38098381-38099380 Phaseolus vulgaris
Phvul.007G259500 1.0kb downstream 1.0kb downstream 3689 true Chr07: 38099381-38103069 Phaseolus vulgaris
Phvul.007G259500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 38102070-38103069 Phaseolus vulgaris
Phvul.007G259500 2.0kb upstream 2.0kb upstream 4689 true Chr07: 38097381-38102069 Phaseolus vulgaris
Phvul.007G259500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 38097381-38099380 Phaseolus vulgaris
Phvul.007G259500 2.0kb downstream 2.0kb downstream 4689 true Chr07: 38099381-38104069 Phaseolus vulgaris
Phvul.007G259500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 38102070-38104069 Phaseolus vulgaris
Phvul.007G259500 5.0kb upstream 5.0kb upstream 7689 true Chr07: 38094381-38102069 Phaseolus vulgaris
Phvul.007G259500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 38094381-38099380 Phaseolus vulgaris
Phvul.007G259500 5.0kb downstream 5.0kb downstream 7689 true Chr07: 38099381-38107069 Phaseolus vulgaris
Phvul.007G259500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 38102070-38107069 Phaseolus vulgaris
Phvul.007G259500 10.0kb upstream 10.0kb upstream 12689 true Chr07: 38089381-38102069 Phaseolus vulgaris
Phvul.007G259500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 38089381-38099380 Phaseolus vulgaris
Phvul.007G259500 10.0kb downstream 10.0kb downstream 12689 true Chr07: 38099381-38112069 Phaseolus vulgaris
Phvul.007G259500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 38102070-38112069 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041215 5273 Angiosperm View MSA
122254246 5265 Fabidae View MSA
123996492 5270 Rosid View MSA
123747966 5271 Pentapetalae View MSA
122789327 5272 Eudicot View MSA
121347269 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.5131 0.0 89.2161 High High
cufflinks 3.16959 0.0 9.81883    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 23.321 0.0 60.5445   High
cufflinks 0.27107 0.0 1.06726 Low  
cufflinks 0.428619 0.0 1.62986 Low  
cufflinks 0.233619 0.0 0.929989 Low  
cufflinks 0.079162 0.0 0.346625 Low Low
cufflinks 0.113003 0.0 0.477835 Low Low
cufflinks 2.3583 0.0 7.5465    
cufflinks 0.651157 0.0 2.3882    

0 Strain