Gene : Phvul.005G118200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR32295:SF12 - PROTEIN IQ-DOMAIN 15-RELATED Genomic Order:  1187
Name:  ? Phvul.005G118200 Secondary Identifier:  ? PAC:37153161
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G118200 0.5kb upstream 0.5kb upstream 6986 true Chr05: 35339362-35346347 Phaseolus vulgaris
Phvul.005G118200 0.5kb upstream 0.5kb upstream 500 false Chr05: 35339362-35339861 Phaseolus vulgaris
Phvul.005G118200 0.5kb downstream 0.5kb downstream 6986 true Chr05: 35339862-35346847 Phaseolus vulgaris
Phvul.005G118200 0.5kb downstream 0.5kb downstream 500 false Chr05: 35346348-35346847 Phaseolus vulgaris
Phvul.005G118200 1.0kb upstream 1.0kb upstream 7486 true Chr05: 35338862-35346347 Phaseolus vulgaris
Phvul.005G118200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35338862-35339861 Phaseolus vulgaris
Phvul.005G118200 1.0kb downstream 1.0kb downstream 7486 true Chr05: 35339862-35347347 Phaseolus vulgaris
Phvul.005G118200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35346348-35347347 Phaseolus vulgaris
Phvul.005G118200 2.0kb upstream 2.0kb upstream 8486 true Chr05: 35337862-35346347 Phaseolus vulgaris
Phvul.005G118200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35337862-35339861 Phaseolus vulgaris
Phvul.005G118200 2.0kb downstream 2.0kb downstream 8486 true Chr05: 35339862-35348347 Phaseolus vulgaris
Phvul.005G118200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35346348-35348347 Phaseolus vulgaris
Phvul.005G118200 5.0kb upstream 5.0kb upstream 11486 true Chr05: 35334862-35346347 Phaseolus vulgaris
Phvul.005G118200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35334862-35339861 Phaseolus vulgaris
Phvul.005G118200 5.0kb downstream 5.0kb downstream 11486 true Chr05: 35339862-35351347 Phaseolus vulgaris
Phvul.005G118200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35346348-35351347 Phaseolus vulgaris
Phvul.005G118200 10.0kb upstream 10.0kb upstream 16486 true Chr05: 35329862-35346347 Phaseolus vulgaris
Phvul.005G118200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35329862-35339861 Phaseolus vulgaris
Phvul.005G118200 10.0kb downstream 10.0kb downstream 16486 true Chr05: 35339862-35356347 Phaseolus vulgaris
Phvul.005G118200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35346348-35356347 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306492 5265 Fabidae View MSA
124066612 5270 Rosid View MSA
123736615 5271 Pentapetalae View MSA
122788189 5272 Eudicot View MSA
122046736 5273 Angiosperm View MSA
121351537 5274 Embryophyte View MSA
123382213 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.1125 0.0 19.3883   Low
cufflinks 12.6448 0.0 33.0763    
cufflinks 15.0977 0.0 39.23   High
cufflinks 10.9938 0.0 29.1237    
cufflinks 10.2297 0.0 27.2824    
cufflinks 10.6185 0.0 28.0503    
cufflinks 8.94079 0.0 23.8437    
cufflinks 9.98026 0.0 26.362    
cufflinks 8.95502 0.0 23.8863    
cufflinks 11.9082 0.0 31.2915    
cufflinks 10.9023 0.0 28.8396    

0 Strain