Gene : Phvul.005G116600 P. vulgaris v2.1
Defline:  (1 of 6) PF06364 - Protein of unknown function (DUF1068) (DUF1068) Genomic Order:  1169
Name:  ? Phvul.005G116600 Secondary Identifier:  ? PAC:37153006
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G116600 0.5kb upstream 0.5kb upstream 2810 true Chr05: 35043473-35046282 Phaseolus vulgaris
Phvul.005G116600 0.5kb upstream 0.5kb upstream 500 false Chr05: 35043473-35043972 Phaseolus vulgaris
Phvul.005G116600 0.5kb downstream 0.5kb downstream 2810 true Chr05: 35043973-35046782 Phaseolus vulgaris
Phvul.005G116600 0.5kb downstream 0.5kb downstream 500 false Chr05: 35046283-35046782 Phaseolus vulgaris
Phvul.005G116600 1.0kb upstream 1.0kb upstream 3310 true Chr05: 35042973-35046282 Phaseolus vulgaris
Phvul.005G116600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35042973-35043972 Phaseolus vulgaris
Phvul.005G116600 1.0kb downstream 1.0kb downstream 3310 true Chr05: 35043973-35047282 Phaseolus vulgaris
Phvul.005G116600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35046283-35047282 Phaseolus vulgaris
Phvul.005G116600 2.0kb upstream 2.0kb upstream 4310 true Chr05: 35041973-35046282 Phaseolus vulgaris
Phvul.005G116600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35041973-35043972 Phaseolus vulgaris
Phvul.005G116600 2.0kb downstream 2.0kb downstream 4310 true Chr05: 35043973-35048282 Phaseolus vulgaris
Phvul.005G116600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35046283-35048282 Phaseolus vulgaris
Phvul.005G116600 5.0kb upstream 5.0kb upstream 7310 true Chr05: 35038973-35046282 Phaseolus vulgaris
Phvul.005G116600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35038973-35043972 Phaseolus vulgaris
Phvul.005G116600 5.0kb downstream 5.0kb downstream 7310 true Chr05: 35043973-35051282 Phaseolus vulgaris
Phvul.005G116600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35046283-35051282 Phaseolus vulgaris
Phvul.005G116600 10.0kb upstream 10.0kb upstream 12310 true Chr05: 35033973-35046282 Phaseolus vulgaris
Phvul.005G116600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35033973-35043972 Phaseolus vulgaris
Phvul.005G116600 10.0kb downstream 10.0kb downstream 12310 true Chr05: 35043973-35056282 Phaseolus vulgaris
Phvul.005G116600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35046283-35056282 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253634 5265 Fabidae View MSA
124061642 5270 Rosid View MSA
123748678 5271 Pentapetalae View MSA
122794910 5272 Eudicot View MSA
122051636 5273 Angiosperm View MSA
121349582 5274 Embryophyte View MSA
123381363 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.78742 0.0 17.5791    
cufflinks 8.65718 0.0 25.0235    
cufflinks 7.11445 0.0 21.0496    
cufflinks 11.6352 0.0 32.7942   High
cufflinks 6.80977 0.0 20.3071    
cufflinks 5.10319 0.0 15.6989    
cufflinks 5.19984 0.0 15.8455    
cufflinks 4.3425 0.0 13.5052    
cufflinks 2.94103 0.0 9.57371   Low
cufflinks 9.41833 0.0 27.0425   High
cufflinks 7.62672 0.0 22.3526    

0 Strain