Gene : Phvul.007G258400 P. vulgaris v2.1
Defline:  (1 of 23) PF03110 - SBP domain (SBP) Genomic Order:  2441
Name:  ? Phvul.007G258400 Secondary Identifier:  ? PAC:37164670
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G258400 0.5kb upstream 0.5kb upstream 5372 true Chr07: 37986116-37991487 Phaseolus vulgaris
Phvul.007G258400 0.5kb upstream 0.5kb upstream 500 false Chr07: 37990988-37991487 Phaseolus vulgaris
Phvul.007G258400 0.5kb downstream 0.5kb downstream 5372 true Chr07: 37985616-37990987 Phaseolus vulgaris
Phvul.007G258400 0.5kb downstream 0.5kb downstream 500 false Chr07: 37985616-37986115 Phaseolus vulgaris
Phvul.007G258400 1.0kb upstream 1.0kb upstream 5872 true Chr07: 37986116-37991987 Phaseolus vulgaris
Phvul.007G258400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37990988-37991987 Phaseolus vulgaris
Phvul.007G258400 1.0kb downstream 1.0kb downstream 5872 true Chr07: 37985116-37990987 Phaseolus vulgaris
Phvul.007G258400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37985116-37986115 Phaseolus vulgaris
Phvul.007G258400 2.0kb upstream 2.0kb upstream 6872 true Chr07: 37986116-37992987 Phaseolus vulgaris
Phvul.007G258400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37990988-37992987 Phaseolus vulgaris
Phvul.007G258400 2.0kb downstream 2.0kb downstream 6872 true Chr07: 37984116-37990987 Phaseolus vulgaris
Phvul.007G258400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37984116-37986115 Phaseolus vulgaris
Phvul.007G258400 5.0kb upstream 5.0kb upstream 9872 true Chr07: 37986116-37995987 Phaseolus vulgaris
Phvul.007G258400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37990988-37995987 Phaseolus vulgaris
Phvul.007G258400 5.0kb downstream 5.0kb downstream 9872 true Chr07: 37981116-37990987 Phaseolus vulgaris
Phvul.007G258400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37981116-37986115 Phaseolus vulgaris
Phvul.007G258400 10.0kb upstream 10.0kb upstream 14872 true Chr07: 37986116-38000987 Phaseolus vulgaris
Phvul.007G258400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37990988-38000987 Phaseolus vulgaris
Phvul.007G258400 10.0kb downstream 10.0kb downstream 14872 true Chr07: 37976116-37990987 Phaseolus vulgaris
Phvul.007G258400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37976116-37986115 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297527 5265 Fabidae View MSA
124036057 5270 Rosid View MSA
123609468 5271 Pentapetalae View MSA
122644116 5272 Eudicot View MSA
122041751 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121309885 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.130377 0.0 0.549562 Low  
cufflinks 0.0468707 0.0 0.221764 Low Low
cufflinks 3.22542 0.0 13.5324   High
cufflinks 0.0896976 0.0 0.406189 Low  
cufflinks 1.41326 0.0 10.1583    
cufflinks 2.65163 0.0 15.6716   High
cufflinks 0.663697 0.0 4.95882    
cufflinks 1.1723 0.0 6.37425    
cufflinks 0.544832 0.0 3.49958    
cufflinks 0.0133214 0.0 0.131479 Low Low
cufflinks 1.88533 0.0 10.9092    

0 Strain