Gene : Phvul.007G258800 P. vulgaris v2.1
Defline:  (1 of 27) PF12796//PF13962 - Ankyrin repeats (3 copies) (Ank_2) // Domain of unknown function (PGG) Genomic Order:  2444
Name:  ? Phvul.007G258800 Secondary Identifier:  ? PAC:37166392
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G258800 0.5kb upstream 0.5kb upstream 5021 true Chr07: 38016437-38021457 Phaseolus vulgaris
Phvul.007G258800 0.5kb upstream 0.5kb upstream 500 false Chr07: 38020958-38021457 Phaseolus vulgaris
Phvul.007G258800 0.5kb downstream 0.5kb downstream 5021 true Chr07: 38015937-38020957 Phaseolus vulgaris
Phvul.007G258800 0.5kb downstream 0.5kb downstream 500 false Chr07: 38015937-38016436 Phaseolus vulgaris
Phvul.007G258800 1.0kb upstream 1.0kb upstream 5521 true Chr07: 38016437-38021957 Phaseolus vulgaris
Phvul.007G258800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 38020958-38021957 Phaseolus vulgaris
Phvul.007G258800 1.0kb downstream 1.0kb downstream 5521 true Chr07: 38015437-38020957 Phaseolus vulgaris
Phvul.007G258800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 38015437-38016436 Phaseolus vulgaris
Phvul.007G258800 2.0kb upstream 2.0kb upstream 6521 true Chr07: 38016437-38022957 Phaseolus vulgaris
Phvul.007G258800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 38020958-38022957 Phaseolus vulgaris
Phvul.007G258800 2.0kb downstream 2.0kb downstream 6521 true Chr07: 38014437-38020957 Phaseolus vulgaris
Phvul.007G258800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 38014437-38016436 Phaseolus vulgaris
Phvul.007G258800 5.0kb upstream 5.0kb upstream 9521 true Chr07: 38016437-38025957 Phaseolus vulgaris
Phvul.007G258800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 38020958-38025957 Phaseolus vulgaris
Phvul.007G258800 5.0kb downstream 5.0kb downstream 9521 true Chr07: 38011437-38020957 Phaseolus vulgaris
Phvul.007G258800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 38011437-38016436 Phaseolus vulgaris
Phvul.007G258800 10.0kb upstream 10.0kb upstream 14521 true Chr07: 38016437-38030957 Phaseolus vulgaris
Phvul.007G258800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 38020958-38030957 Phaseolus vulgaris
Phvul.007G258800 10.0kb downstream 10.0kb downstream 14521 true Chr07: 38006437-38020957 Phaseolus vulgaris
Phvul.007G258800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 38006437-38016436 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310241 5265 Fabidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.18281 0.0 9.59978   Low
cufflinks 8.71525 0.0 23.7415   High
cufflinks 3.14525 0.0 9.45722   Low
cufflinks 3.89738 0.0 11.5815    
cufflinks 7.86875 0.0 21.7707    
cufflinks 10.4949 0.0 28.1281   High
cufflinks 5.63641 0.0 15.9758    
cufflinks 5.366 0.0 15.2334    
cufflinks 4.41441 0.0 12.8513    
cufflinks 5.43488 0.0 15.4929    
cufflinks 6.57739 0.0 18.4634    

0 Strain