Gene : Phvul.006G057600 P. vulgaris v2.1
Defline:  (1 of 6) 3.6.1.13//3.6.1.22//3.6.1.53 - ADP-ribose diphosphatase / ADPR-PPase // NAD(+) diphosphatase / NADP pyrophosphatase // Mn(2+)-dependent ADP-ribose/CDP-alcohol diphosphatase / Mn(2+)-dependent ADP-ribose/CDP-alcohol pyrophosphatase Genomic Order:  535
Name:  ? Phvul.006G057600 Secondary Identifier:  ? PAC:37173872
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5381 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G057600 0.5kb upstream 0.5kb upstream 4172 true Chr06: 16456711-16460882 Phaseolus vulgaris
Phvul.006G057600 0.5kb upstream 0.5kb upstream 500 false Chr06: 16460383-16460882 Phaseolus vulgaris
Phvul.006G057600 0.5kb downstream 0.5kb downstream 4172 true Chr06: 16456211-16460382 Phaseolus vulgaris
Phvul.006G057600 0.5kb downstream 0.5kb downstream 500 false Chr06: 16456211-16456710 Phaseolus vulgaris
Phvul.006G057600 1.0kb upstream 1.0kb upstream 4672 true Chr06: 16456711-16461382 Phaseolus vulgaris
Phvul.006G057600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16460383-16461382 Phaseolus vulgaris
Phvul.006G057600 1.0kb downstream 1.0kb downstream 4672 true Chr06: 16455711-16460382 Phaseolus vulgaris
Phvul.006G057600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16455711-16456710 Phaseolus vulgaris
Phvul.006G057600 2.0kb upstream 2.0kb upstream 5672 true Chr06: 16456711-16462382 Phaseolus vulgaris
Phvul.006G057600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16460383-16462382 Phaseolus vulgaris
Phvul.006G057600 2.0kb downstream 2.0kb downstream 5672 true Chr06: 16454711-16460382 Phaseolus vulgaris
Phvul.006G057600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16454711-16456710 Phaseolus vulgaris
Phvul.006G057600 5.0kb upstream 5.0kb upstream 8672 true Chr06: 16456711-16465382 Phaseolus vulgaris
Phvul.006G057600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16460383-16465382 Phaseolus vulgaris
Phvul.006G057600 5.0kb downstream 5.0kb downstream 8672 true Chr06: 16451711-16460382 Phaseolus vulgaris
Phvul.006G057600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16451711-16456710 Phaseolus vulgaris
Phvul.006G057600 10.0kb upstream 10.0kb upstream 13672 true Chr06: 16456711-16470382 Phaseolus vulgaris
Phvul.006G057600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16460383-16470382 Phaseolus vulgaris
Phvul.006G057600 10.0kb downstream 10.0kb downstream 13672 true Chr06: 16446711-16460382 Phaseolus vulgaris
Phvul.006G057600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16446711-16456710 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314396 5265 Fabidae View MSA
124071917 5270 Rosid View MSA
123746480 5271 Pentapetalae View MSA
122788941 5272 Eudicot View MSA
122049902 5273 Angiosperm View MSA
121347954 5274 Embryophyte View MSA
123428722 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.41471 0.0 1.64241 Low Low
cufflinks 3.14651 0.0 14.588    
cufflinks 1.35149 0.0 7.79175    
cufflinks 0.704925 0.0 4.72952    
cufflinks 1.73123 0.0 9.50217    
cufflinks 0.843433 0.0 6.58648    
cufflinks 8.68161 0.0 30.9664   High
cufflinks 4.04483 0.0 24.4776   High
cufflinks 0.873863 0.0 5.5537    
cufflinks 1.02537 0.0 8.1111    
cufflinks 2.48324 0.0 14.9267    

0 Strain