Gene : Phvul.010G116500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24073:SF345 - RAS-RELATED PROTEIN RABA3 Genomic Order:  1166
Name:  ? Phvul.010G116500 Secondary Identifier:  ? PAC:37143200
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G116500 0.5kb upstream 0.5kb upstream 2132 true Chr10: 39408666-39410797 Phaseolus vulgaris
Phvul.010G116500 0.5kb upstream 0.5kb upstream 500 false Chr10: 39408666-39409165 Phaseolus vulgaris
Phvul.010G116500 0.5kb downstream 0.5kb downstream 2132 true Chr10: 39409166-39411297 Phaseolus vulgaris
Phvul.010G116500 0.5kb downstream 0.5kb downstream 500 false Chr10: 39410798-39411297 Phaseolus vulgaris
Phvul.010G116500 1.0kb upstream 1.0kb upstream 2632 true Chr10: 39408166-39410797 Phaseolus vulgaris
Phvul.010G116500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39408166-39409165 Phaseolus vulgaris
Phvul.010G116500 1.0kb downstream 1.0kb downstream 2632 true Chr10: 39409166-39411797 Phaseolus vulgaris
Phvul.010G116500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39410798-39411797 Phaseolus vulgaris
Phvul.010G116500 2.0kb upstream 2.0kb upstream 3632 true Chr10: 39407166-39410797 Phaseolus vulgaris
Phvul.010G116500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39407166-39409165 Phaseolus vulgaris
Phvul.010G116500 2.0kb downstream 2.0kb downstream 3632 true Chr10: 39409166-39412797 Phaseolus vulgaris
Phvul.010G116500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39410798-39412797 Phaseolus vulgaris
Phvul.010G116500 5.0kb upstream 5.0kb upstream 6632 true Chr10: 39404166-39410797 Phaseolus vulgaris
Phvul.010G116500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39404166-39409165 Phaseolus vulgaris
Phvul.010G116500 5.0kb downstream 5.0kb downstream 6632 true Chr10: 39409166-39415797 Phaseolus vulgaris
Phvul.010G116500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39410798-39415797 Phaseolus vulgaris
Phvul.010G116500 10.0kb upstream 10.0kb upstream 11632 true Chr10: 39399166-39410797 Phaseolus vulgaris
Phvul.010G116500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39399166-39409165 Phaseolus vulgaris
Phvul.010G116500 10.0kb downstream 10.0kb downstream 11632 true Chr10: 39409166-39420797 Phaseolus vulgaris
Phvul.010G116500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39410798-39420797 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302675 5265 Fabidae View MSA
124068708 5270 Rosid View MSA
123748749 5271 Pentapetalae View MSA
122772791 5272 Eudicot View MSA
122042184 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.70364 0.0 5.816   Low
cufflinks 5.95114 0.0 17.6069    
cufflinks 4.72416 0.0 14.3619    
cufflinks 2.56462 0.0 8.43914    
cufflinks 8.11072 0.0 23.3673    
cufflinks 6.64126 0.0 19.3991    
cufflinks 4.806 0.0 14.5732    
cufflinks 3.71475 0.0 11.5698    
cufflinks 2.46654 0.0 8.06834    
cufflinks 1.00605 0.0 3.63094   Low
cufflinks 12.3436 0.0 34.0735   High

0 Strain