Gene : Phvul.010G115000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13950 - RABCONNECTIN-RELATED Genomic Order:  1151
Name:  ? Phvul.010G115000 Secondary Identifier:  ? PAC:37142223
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G115000 0.5kb upstream 0.5kb upstream 17836 true Chr10: 39209691-39227526 Phaseolus vulgaris
Phvul.010G115000 0.5kb upstream 0.5kb upstream 500 false Chr10: 39227027-39227526 Phaseolus vulgaris
Phvul.010G115000 0.5kb downstream 0.5kb downstream 17836 true Chr10: 39209191-39227026 Phaseolus vulgaris
Phvul.010G115000 0.5kb downstream 0.5kb downstream 500 false Chr10: 39209191-39209690 Phaseolus vulgaris
Phvul.010G115000 1.0kb upstream 1.0kb upstream 18336 true Chr10: 39209691-39228026 Phaseolus vulgaris
Phvul.010G115000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39227027-39228026 Phaseolus vulgaris
Phvul.010G115000 1.0kb downstream 1.0kb downstream 18336 true Chr10: 39208691-39227026 Phaseolus vulgaris
Phvul.010G115000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39208691-39209690 Phaseolus vulgaris
Phvul.010G115000 2.0kb upstream 2.0kb upstream 19336 true Chr10: 39209691-39229026 Phaseolus vulgaris
Phvul.010G115000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39227027-39229026 Phaseolus vulgaris
Phvul.010G115000 2.0kb downstream 2.0kb downstream 19336 true Chr10: 39207691-39227026 Phaseolus vulgaris
Phvul.010G115000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39207691-39209690 Phaseolus vulgaris
Phvul.010G115000 5.0kb upstream 5.0kb upstream 22336 true Chr10: 39209691-39232026 Phaseolus vulgaris
Phvul.010G115000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39227027-39232026 Phaseolus vulgaris
Phvul.010G115000 5.0kb downstream 5.0kb downstream 22336 true Chr10: 39204691-39227026 Phaseolus vulgaris
Phvul.010G115000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39204691-39209690 Phaseolus vulgaris
Phvul.010G115000 10.0kb upstream 10.0kb upstream 27336 true Chr10: 39209691-39237026 Phaseolus vulgaris
Phvul.010G115000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39227027-39237026 Phaseolus vulgaris
Phvul.010G115000 10.0kb downstream 10.0kb downstream 27336 true Chr10: 39199691-39227026 Phaseolus vulgaris
Phvul.010G115000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39199691-39209690 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304149 5265 Fabidae View MSA
124050248 5270 Rosid View MSA
123750499 5271 Pentapetalae View MSA
122789349 5272 Eudicot View MSA
122049710 5273 Angiosperm View MSA
121345516 5274 Embryophyte View MSA
123380232 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.00493 0.0 3.51749   Low
cufflinks 2.73535 0.0 9.26274    
cufflinks 7.07075 0.0 22.5704    
cufflinks 1.99823 0.0 6.2873   Low
cufflinks 5.65997 0.0 17.9938    
cufflinks 6.07226 0.0 19.2967    
cufflinks 6.11552 0.0 19.4311    
cufflinks 5.13398 0.0 14.51    
cufflinks 7.29645 0.0 20.4091    
cufflinks 7.39049 0.0 23.5967    
cufflinks 3.76257 0.0 12.2789    

0 Strain