Gene : Phvul.006G056700 P. vulgaris v2.1
Defline:  (1 of 3) PTHR35708:SF1 - GB Genomic Order:  525
Name:  ? Phvul.006G056700 Secondary Identifier:  ? PAC:37172766
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G056700 0.5kb upstream 0.5kb upstream 2152 true Chr06: 16358532-16360683 Phaseolus vulgaris
Phvul.006G056700 0.5kb upstream 0.5kb upstream 500 false Chr06: 16358532-16359031 Phaseolus vulgaris
Phvul.006G056700 0.5kb downstream 0.5kb downstream 2152 true Chr06: 16359032-16361183 Phaseolus vulgaris
Phvul.006G056700 0.5kb downstream 0.5kb downstream 500 false Chr06: 16360684-16361183 Phaseolus vulgaris
Phvul.006G056700 1.0kb upstream 1.0kb upstream 2652 true Chr06: 16358032-16360683 Phaseolus vulgaris
Phvul.006G056700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16358032-16359031 Phaseolus vulgaris
Phvul.006G056700 1.0kb downstream 1.0kb downstream 2652 true Chr06: 16359032-16361683 Phaseolus vulgaris
Phvul.006G056700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16360684-16361683 Phaseolus vulgaris
Phvul.006G056700 2.0kb upstream 2.0kb upstream 3652 true Chr06: 16357032-16360683 Phaseolus vulgaris
Phvul.006G056700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16357032-16359031 Phaseolus vulgaris
Phvul.006G056700 2.0kb downstream 2.0kb downstream 3652 true Chr06: 16359032-16362683 Phaseolus vulgaris
Phvul.006G056700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16360684-16362683 Phaseolus vulgaris
Phvul.006G056700 5.0kb upstream 5.0kb upstream 6652 true Chr06: 16354032-16360683 Phaseolus vulgaris
Phvul.006G056700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16354032-16359031 Phaseolus vulgaris
Phvul.006G056700 5.0kb downstream 5.0kb downstream 6652 true Chr06: 16359032-16365683 Phaseolus vulgaris
Phvul.006G056700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16360684-16365683 Phaseolus vulgaris
Phvul.006G056700 10.0kb upstream 10.0kb upstream 11652 true Chr06: 16349032-16360683 Phaseolus vulgaris
Phvul.006G056700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16349032-16359031 Phaseolus vulgaris
Phvul.006G056700 10.0kb downstream 10.0kb downstream 11652 true Chr06: 16359032-16370683 Phaseolus vulgaris
Phvul.006G056700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16360684-16370683 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298594 5265 Fabidae View MSA
124070540 5270 Rosid View MSA
123748172 5271 Pentapetalae View MSA
122794330 5272 Eudicot View MSA
122044423 5273 Angiosperm View MSA
121310293 5274 Embryophyte View MSA
123347819 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.390319 0.0 1.51393 Low  
cufflinks 0.18838 0.0 0.775933 Low Low
cufflinks 0.372121 0.0 1.44429 Low  
cufflinks 0.468624 0.0 1.81133 Low  
cufflinks 0.312744 0.0 1.24618 Low  
cufflinks 0.553712 0.0 2.09388   High
cufflinks 0.266448 0.0 1.07049 Low  
cufflinks 0.404068 0.0 1.55976 Low  
cufflinks 0.632164 0.0 2.37945   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.340366 0.0 1.34609 Low  

0 Strain