Gene : Phvul.010G119300 P. vulgaris v2.1
Defline:  (1 of 1) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein Genomic Order:  1196
Name:  ? Phvul.010G119300 Secondary Identifier:  ? PAC:37143063
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-622 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G119300 0.5kb upstream 0.5kb upstream 4894 true Chr10: 39941500-39946393 Phaseolus vulgaris
Phvul.010G119300 0.5kb upstream 0.5kb upstream 500 false Chr10: 39945894-39946393 Phaseolus vulgaris
Phvul.010G119300 0.5kb downstream 0.5kb downstream 4894 true Chr10: 39941000-39945893 Phaseolus vulgaris
Phvul.010G119300 0.5kb downstream 0.5kb downstream 500 false Chr10: 39941000-39941499 Phaseolus vulgaris
Phvul.010G119300 1.0kb upstream 1.0kb upstream 5394 true Chr10: 39941500-39946893 Phaseolus vulgaris
Phvul.010G119300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39945894-39946893 Phaseolus vulgaris
Phvul.010G119300 1.0kb downstream 1.0kb downstream 5394 true Chr10: 39940500-39945893 Phaseolus vulgaris
Phvul.010G119300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39940500-39941499 Phaseolus vulgaris
Phvul.010G119300 2.0kb upstream 2.0kb upstream 6394 true Chr10: 39941500-39947893 Phaseolus vulgaris
Phvul.010G119300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39945894-39947893 Phaseolus vulgaris
Phvul.010G119300 2.0kb downstream 2.0kb downstream 6394 true Chr10: 39939500-39945893 Phaseolus vulgaris
Phvul.010G119300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39939500-39941499 Phaseolus vulgaris
Phvul.010G119300 5.0kb upstream 5.0kb upstream 9394 true Chr10: 39941500-39950893 Phaseolus vulgaris
Phvul.010G119300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39945894-39950893 Phaseolus vulgaris
Phvul.010G119300 5.0kb downstream 5.0kb downstream 9394 true Chr10: 39936500-39945893 Phaseolus vulgaris
Phvul.010G119300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39936500-39941499 Phaseolus vulgaris
Phvul.010G119300 10.0kb upstream 10.0kb upstream 14394 true Chr10: 39941500-39955893 Phaseolus vulgaris
Phvul.010G119300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39945894-39955893 Phaseolus vulgaris
Phvul.010G119300 10.0kb downstream 10.0kb downstream 14394 true Chr10: 39931500-39945893 Phaseolus vulgaris
Phvul.010G119300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39931500-39941499 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311550 5265 Fabidae View MSA
124071103 5270 Rosid View MSA
123740626 5271 Pentapetalae View MSA
122790728 5272 Eudicot View MSA
122042612 5273 Angiosperm View MSA
121345518 5274 Embryophyte View MSA
123424723 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.2601 0.0 22.0143   Low
cufflinks 44.563 0.0 119.326 High  
cufflinks 113.616 0.0 338.918 High High
cufflinks 12.3313 0.0 32.23    
cufflinks 24.9487 0.0 64.6158    
cufflinks 69.238 0.0 193.575 High  
cufflinks 11.7051 0.0 30.5395    
cufflinks 49.1796 0.0 133.478 High  
cufflinks 4.255 0.0 12.0126   Low
cufflinks 38.9723 0.0 103.148 High  
cufflinks 41.5322 0.0 110.146 High  

0 Strain