Gene : Phvul.010G118700 P. vulgaris v2.1

Defline:  (1 of 1) PTHR31989:SF45 - NAC DOMAIN-CONTAINING PROTEIN 43-RELATED Genomic Order:  1190
Name:  ? Phvul.010G118700 Secondary Identifier:  ? PAC:37143549

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G118700 0.5kb upstream 0.5kb upstream 2652 true Chr10: 39859044-39861695 Phaseolus vulgaris
Phvul.010G118700 0.5kb upstream 0.5kb upstream 500 false Chr10: 39861196-39861695 Phaseolus vulgaris
Phvul.010G118700 0.5kb downstream 0.5kb downstream 2652 true Chr10: 39858544-39861195 Phaseolus vulgaris
Phvul.010G118700 0.5kb downstream 0.5kb downstream 500 false Chr10: 39858544-39859043 Phaseolus vulgaris
Phvul.010G118700 1.0kb upstream 1.0kb upstream 3152 true Chr10: 39859044-39862195 Phaseolus vulgaris
Phvul.010G118700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39861196-39862195 Phaseolus vulgaris
Phvul.010G118700 1.0kb downstream 1.0kb downstream 3152 true Chr10: 39858044-39861195 Phaseolus vulgaris
Phvul.010G118700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39858044-39859043 Phaseolus vulgaris
Phvul.010G118700 2.0kb upstream 2.0kb upstream 4152 true Chr10: 39859044-39863195 Phaseolus vulgaris
Phvul.010G118700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39861196-39863195 Phaseolus vulgaris
Phvul.010G118700 2.0kb downstream 2.0kb downstream 4152 true Chr10: 39857044-39861195 Phaseolus vulgaris
Phvul.010G118700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39857044-39859043 Phaseolus vulgaris
Phvul.010G118700 5.0kb upstream 5.0kb upstream 7152 true Chr10: 39859044-39866195 Phaseolus vulgaris
Phvul.010G118700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39861196-39866195 Phaseolus vulgaris
Phvul.010G118700 5.0kb downstream 5.0kb downstream 7152 true Chr10: 39854044-39861195 Phaseolus vulgaris
Phvul.010G118700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39854044-39859043 Phaseolus vulgaris
Phvul.010G118700 10.0kb upstream 10.0kb upstream 12152 true Chr10: 39859044-39871195 Phaseolus vulgaris
Phvul.010G118700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39861196-39871195 Phaseolus vulgaris
Phvul.010G118700 10.0kb downstream 10.0kb downstream 12152 true Chr10: 39849044-39861195 Phaseolus vulgaris
Phvul.010G118700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39849044-39859043 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299557 5265 Fabidae View MSA
124064226 5270 Rosid View MSA
123752763 5271 Pentapetalae View MSA
122791711 5272 Eudicot View MSA
122049306 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.328189 0.0 1.23737 Low Low
cufflinks 5.55076 0.0 15.4972    
cufflinks 1.8778 0.0 5.91335    
cufflinks 0.831548 0.0 2.86147   Low
cufflinks 28.7066 0.0 74.4173   High
cufflinks 8.67711 0.0 23.2977    
cufflinks 11.2057 0.0 29.3913    
cufflinks 1.77631 0.0 5.58318    
cufflinks 5.6356 0.0 15.5547    
cufflinks 7.41933 0.0 20.2706    
cufflinks 50.2986 0.0 134.431 High High

0 Strain