Gene : Phvul.006G058000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15092:SF22 - TARGET OF EGR1 PROTEIN 1 Genomic Order:  539
Name:  ? Phvul.006G058000 Secondary Identifier:  ? PAC:37173036
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G058000 0.5kb upstream 0.5kb upstream 4491 true Chr06: 16516086-16520576 Phaseolus vulgaris
Phvul.006G058000 0.5kb upstream 0.5kb upstream 500 false Chr06: 16520077-16520576 Phaseolus vulgaris
Phvul.006G058000 0.5kb downstream 0.5kb downstream 4491 true Chr06: 16515586-16520076 Phaseolus vulgaris
Phvul.006G058000 0.5kb downstream 0.5kb downstream 500 false Chr06: 16515586-16516085 Phaseolus vulgaris
Phvul.006G058000 1.0kb upstream 1.0kb upstream 4991 true Chr06: 16516086-16521076 Phaseolus vulgaris
Phvul.006G058000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16520077-16521076 Phaseolus vulgaris
Phvul.006G058000 1.0kb downstream 1.0kb downstream 4991 true Chr06: 16515086-16520076 Phaseolus vulgaris
Phvul.006G058000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16515086-16516085 Phaseolus vulgaris
Phvul.006G058000 2.0kb upstream 2.0kb upstream 5991 true Chr06: 16516086-16522076 Phaseolus vulgaris
Phvul.006G058000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16520077-16522076 Phaseolus vulgaris
Phvul.006G058000 2.0kb downstream 2.0kb downstream 5991 true Chr06: 16514086-16520076 Phaseolus vulgaris
Phvul.006G058000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16514086-16516085 Phaseolus vulgaris
Phvul.006G058000 5.0kb upstream 5.0kb upstream 8991 true Chr06: 16516086-16525076 Phaseolus vulgaris
Phvul.006G058000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16520077-16525076 Phaseolus vulgaris
Phvul.006G058000 5.0kb downstream 5.0kb downstream 8991 true Chr06: 16511086-16520076 Phaseolus vulgaris
Phvul.006G058000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16511086-16516085 Phaseolus vulgaris
Phvul.006G058000 10.0kb upstream 10.0kb upstream 13991 true Chr06: 16516086-16530076 Phaseolus vulgaris
Phvul.006G058000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16520077-16530076 Phaseolus vulgaris
Phvul.006G058000 10.0kb downstream 10.0kb downstream 13991 true Chr06: 16506086-16520076 Phaseolus vulgaris
Phvul.006G058000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16506086-16516085 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309049 5265 Fabidae View MSA
124073330 5270 Rosid View MSA
123738401 5271 Pentapetalae View MSA
122796847 5272 Eudicot View MSA
122041531 5273 Angiosperm View MSA
121345225 5274 Embryophyte View MSA
123427620 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.37917 0.0 8.99153   Low
cufflinks 2.51206 0.0 13.3806    
cufflinks 2.81315 0.0 12.687    
cufflinks 1.5928 0.0 7.25936    
cufflinks 1.62241 0.0 7.14541    
cufflinks 2.84235 0.0 13.3112    
cufflinks 2.80531 0.0 15.3488    
cufflinks 3.15839 0.0 12.0809   High
cufflinks 2.0806 0.0 10.6595    
cufflinks 1.85847 0.0 11.4071    
cufflinks 1.15359 0.0 6.62316   Low

0 Strain