Gene : Phvul.006G058800 P. vulgaris v2.1
Defline:  (1 of 16) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  546
Name:  ? Phvul.006G058800 Secondary Identifier:  ? PAC:37173220
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G058800 0.5kb upstream 0.5kb upstream 5864 true Chr06: 16573540-16579403 Phaseolus vulgaris
Phvul.006G058800 0.5kb upstream 0.5kb upstream 500 false Chr06: 16573540-16574039 Phaseolus vulgaris
Phvul.006G058800 0.5kb downstream 0.5kb downstream 5864 true Chr06: 16574040-16579903 Phaseolus vulgaris
Phvul.006G058800 0.5kb downstream 0.5kb downstream 500 false Chr06: 16579404-16579903 Phaseolus vulgaris
Phvul.006G058800 1.0kb upstream 1.0kb upstream 6364 true Chr06: 16573040-16579403 Phaseolus vulgaris
Phvul.006G058800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16573040-16574039 Phaseolus vulgaris
Phvul.006G058800 1.0kb downstream 1.0kb downstream 6364 true Chr06: 16574040-16580403 Phaseolus vulgaris
Phvul.006G058800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16579404-16580403 Phaseolus vulgaris
Phvul.006G058800 2.0kb upstream 2.0kb upstream 7364 true Chr06: 16572040-16579403 Phaseolus vulgaris
Phvul.006G058800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16572040-16574039 Phaseolus vulgaris
Phvul.006G058800 2.0kb downstream 2.0kb downstream 7364 true Chr06: 16574040-16581403 Phaseolus vulgaris
Phvul.006G058800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16579404-16581403 Phaseolus vulgaris
Phvul.006G058800 5.0kb upstream 5.0kb upstream 10364 true Chr06: 16569040-16579403 Phaseolus vulgaris
Phvul.006G058800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16569040-16574039 Phaseolus vulgaris
Phvul.006G058800 5.0kb downstream 5.0kb downstream 10364 true Chr06: 16574040-16584403 Phaseolus vulgaris
Phvul.006G058800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16579404-16584403 Phaseolus vulgaris
Phvul.006G058800 10.0kb upstream 10.0kb upstream 15364 true Chr06: 16564040-16579403 Phaseolus vulgaris
Phvul.006G058800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16564040-16574039 Phaseolus vulgaris
Phvul.006G058800 10.0kb downstream 10.0kb downstream 15364 true Chr06: 16574040-16589403 Phaseolus vulgaris
Phvul.006G058800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16579404-16589403 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303891 5265 Fabidae View MSA
124065828 5270 Rosid View MSA
123740930 5271 Pentapetalae View MSA
122786226 5272 Eudicot View MSA
122043167 5273 Angiosperm View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.08222 0.0 21.246    
cufflinks 8.1258 0.0 21.3217    
cufflinks 3.34872 0.0 9.40785   Low
cufflinks 4.85972 0.0 13.363    
cufflinks 5.33228 0.0 14.5289    
cufflinks 5.12393 0.0 13.8839    
cufflinks 11.4696 0.0 29.6954   High
cufflinks 9.29229 0.0 24.1628    
cufflinks 11.0952 0.0 28.749    
cufflinks 14.1743 0.0 36.6411   High
cufflinks 6.81983 0.0 18.1518    

0 Strain