Gene : Phvul.010G120900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31140:SF4 - B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA1-RELATED Genomic Order:  1212
Name:  ? Phvul.010G120900 Secondary Identifier:  ? PAC:37143034
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G120900 0.5kb upstream 0.5kb upstream 3235 true Chr10: 40188385-40191619 Phaseolus vulgaris
Phvul.010G120900 0.5kb upstream 0.5kb upstream 500 false Chr10: 40188385-40188884 Phaseolus vulgaris
Phvul.010G120900 0.5kb downstream 0.5kb downstream 3235 true Chr10: 40188885-40192119 Phaseolus vulgaris
Phvul.010G120900 0.5kb downstream 0.5kb downstream 500 false Chr10: 40191620-40192119 Phaseolus vulgaris
Phvul.010G120900 1.0kb upstream 1.0kb upstream 3735 true Chr10: 40187885-40191619 Phaseolus vulgaris
Phvul.010G120900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40187885-40188884 Phaseolus vulgaris
Phvul.010G120900 1.0kb downstream 1.0kb downstream 3735 true Chr10: 40188885-40192619 Phaseolus vulgaris
Phvul.010G120900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40191620-40192619 Phaseolus vulgaris
Phvul.010G120900 2.0kb upstream 2.0kb upstream 4735 true Chr10: 40186885-40191619 Phaseolus vulgaris
Phvul.010G120900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40186885-40188884 Phaseolus vulgaris
Phvul.010G120900 2.0kb downstream 2.0kb downstream 4735 true Chr10: 40188885-40193619 Phaseolus vulgaris
Phvul.010G120900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40191620-40193619 Phaseolus vulgaris
Phvul.010G120900 5.0kb upstream 5.0kb upstream 7735 true Chr10: 40183885-40191619 Phaseolus vulgaris
Phvul.010G120900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40183885-40188884 Phaseolus vulgaris
Phvul.010G120900 5.0kb downstream 5.0kb downstream 7735 true Chr10: 40188885-40196619 Phaseolus vulgaris
Phvul.010G120900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40191620-40196619 Phaseolus vulgaris
Phvul.010G120900 10.0kb upstream 10.0kb upstream 12735 true Chr10: 40178885-40191619 Phaseolus vulgaris
Phvul.010G120900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40178885-40188884 Phaseolus vulgaris
Phvul.010G120900 10.0kb downstream 10.0kb downstream 12735 true Chr10: 40188885-40201619 Phaseolus vulgaris
Phvul.010G120900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40191620-40201619 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313330 5265 Fabidae View MSA
124069436 5270 Rosid View MSA
123743929 5271 Pentapetalae View MSA
122797539 5272 Eudicot View MSA
122049835 5273 Angiosperm View MSA
121349423 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.01344 0.0 34.3375    
cufflinks 2.59092 0.0 10.0607    
cufflinks 16.464 0.0 57.8787    
cufflinks 23.0285 0.0 80.5887   High
cufflinks 2.16746 0.0 8.86947    
cufflinks 20.4312 0.0 71.5809   High
cufflinks 6.31403 0.0 22.8729    
cufflinks 24.1451 0.0 78.6206   High
cufflinks 0.791385 0.0 3.24629   Low
cufflinks 0.784632 0.0 4.18562   Low
cufflinks 4.69388 0.0 18.5562    

0 Strain