Gene : Phvul.010G119700 P. vulgaris v2.1
Defline:  (1 of 3) K12130 - pseudo-response regulator 5 (PRR5) Genomic Order:  1200
Name:  ? Phvul.010G119700 Secondary Identifier:  ? PAC:37144095
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G119700 0.5kb upstream 0.5kb upstream 5632 true Chr10: 39994598-40000229 Phaseolus vulgaris
Phvul.010G119700 0.5kb upstream 0.5kb upstream 500 false Chr10: 39994598-39995097 Phaseolus vulgaris
Phvul.010G119700 0.5kb downstream 0.5kb downstream 5632 true Chr10: 39995098-40000729 Phaseolus vulgaris
Phvul.010G119700 0.5kb downstream 0.5kb downstream 500 false Chr10: 40000230-40000729 Phaseolus vulgaris
Phvul.010G119700 1.0kb upstream 1.0kb upstream 6132 true Chr10: 39994098-40000229 Phaseolus vulgaris
Phvul.010G119700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39994098-39995097 Phaseolus vulgaris
Phvul.010G119700 1.0kb downstream 1.0kb downstream 6132 true Chr10: 39995098-40001229 Phaseolus vulgaris
Phvul.010G119700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40000230-40001229 Phaseolus vulgaris
Phvul.010G119700 2.0kb upstream 2.0kb upstream 7132 true Chr10: 39993098-40000229 Phaseolus vulgaris
Phvul.010G119700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39993098-39995097 Phaseolus vulgaris
Phvul.010G119700 2.0kb downstream 2.0kb downstream 7132 true Chr10: 39995098-40002229 Phaseolus vulgaris
Phvul.010G119700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40000230-40002229 Phaseolus vulgaris
Phvul.010G119700 5.0kb upstream 5.0kb upstream 10132 true Chr10: 39990098-40000229 Phaseolus vulgaris
Phvul.010G119700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39990098-39995097 Phaseolus vulgaris
Phvul.010G119700 5.0kb downstream 5.0kb downstream 10132 true Chr10: 39995098-40005229 Phaseolus vulgaris
Phvul.010G119700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40000230-40005229 Phaseolus vulgaris
Phvul.010G119700 10.0kb upstream 10.0kb upstream 15132 true Chr10: 39985098-40000229 Phaseolus vulgaris
Phvul.010G119700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39985098-39995097 Phaseolus vulgaris
Phvul.010G119700 10.0kb downstream 10.0kb downstream 15132 true Chr10: 39995098-40010229 Phaseolus vulgaris
Phvul.010G119700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40000230-40010229 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310299 5265 Fabidae View MSA
124070705 5270 Rosid View MSA
123743844 5271 Pentapetalae View MSA
122796844 5272 Eudicot View MSA
122049378 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121348343 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.49026 0.0 31.5705    
cufflinks 13.1123 0.0 42.2213    
cufflinks 47.207 0.0 166.568 High High
cufflinks 5.27806 0.0 19.7088    
cufflinks 13.0854 0.0 42.307    
cufflinks 25.2533 0.0 81.575   High
cufflinks 6.40357 0.0 22.7815    
cufflinks 3.23557 0.0 11.3312   Low
cufflinks 5.28582 0.0 19.543    
cufflinks 22.8445 0.0 73.1943    
cufflinks 13.4372 0.0 43.3203    

0 Strain