Gene : Phvul.010G119900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11562:SF31 - RE54080P Genomic Order:  1202
Name:  ? Phvul.010G119900 Secondary Identifier:  ? PAC:37143432
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G119900 0.5kb upstream 0.5kb upstream 5443 true Chr10: 40026663-40032105 Phaseolus vulgaris
Phvul.010G119900 0.5kb upstream 0.5kb upstream 500 false Chr10: 40026663-40027162 Phaseolus vulgaris
Phvul.010G119900 0.5kb downstream 0.5kb downstream 5443 true Chr10: 40027163-40032605 Phaseolus vulgaris
Phvul.010G119900 0.5kb downstream 0.5kb downstream 500 false Chr10: 40032106-40032605 Phaseolus vulgaris
Phvul.010G119900 1.0kb upstream 1.0kb upstream 5943 true Chr10: 40026163-40032105 Phaseolus vulgaris
Phvul.010G119900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40026163-40027162 Phaseolus vulgaris
Phvul.010G119900 1.0kb downstream 1.0kb downstream 5943 true Chr10: 40027163-40033105 Phaseolus vulgaris
Phvul.010G119900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40032106-40033105 Phaseolus vulgaris
Phvul.010G119900 2.0kb upstream 2.0kb upstream 6943 true Chr10: 40025163-40032105 Phaseolus vulgaris
Phvul.010G119900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40025163-40027162 Phaseolus vulgaris
Phvul.010G119900 2.0kb downstream 2.0kb downstream 6943 true Chr10: 40027163-40034105 Phaseolus vulgaris
Phvul.010G119900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40032106-40034105 Phaseolus vulgaris
Phvul.010G119900 5.0kb upstream 5.0kb upstream 9943 true Chr10: 40022163-40032105 Phaseolus vulgaris
Phvul.010G119900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40022163-40027162 Phaseolus vulgaris
Phvul.010G119900 5.0kb downstream 5.0kb downstream 9943 true Chr10: 40027163-40037105 Phaseolus vulgaris
Phvul.010G119900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40032106-40037105 Phaseolus vulgaris
Phvul.010G119900 10.0kb upstream 10.0kb upstream 14943 true Chr10: 40017163-40032105 Phaseolus vulgaris
Phvul.010G119900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40017163-40027162 Phaseolus vulgaris
Phvul.010G119900 10.0kb downstream 10.0kb downstream 14943 true Chr10: 40027163-40042105 Phaseolus vulgaris
Phvul.010G119900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40032106-40042105 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313245 5265 Fabidae View MSA
124072009 5270 Rosid View MSA
123747462 5271 Pentapetalae View MSA
122791570 5272 Eudicot View MSA
122042960 5273 Angiosperm View MSA
121349526 5274 Embryophyte View MSA
123427530 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.4207 0.0 86.2454    
cufflinks 23.8648 0.0 84.1446    
cufflinks 22.374 0.0 73.4395    
cufflinks 15.2912 0.0 57.7886   Low
cufflinks 20.4492 0.0 74.7331    
cufflinks 16.2267 0.0 60.0542   Low
cufflinks 21.7913 0.0 77.5637    
cufflinks 31.0902 0.0 110.865 High High
cufflinks 20.3079 0.0 72.7098    
cufflinks 32.5733 0.0 114.744   High
cufflinks 16.318 0.0 60.1794   Low

0 Strain