Gene : Phvul.010G122200 P. vulgaris v2.1
Defline:  (1 of 1) K03061 - 26S proteasome regulatory subunit T1 (PSMC2, RPT1) Genomic Order:  1227
Name:  ? Phvul.010G122200 Secondary Identifier:  ? PAC:37144240
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G122200 0.5kb upstream 0.5kb upstream 4447 true Chr10: 40336217-40340663 Phaseolus vulgaris
Phvul.010G122200 0.5kb upstream 0.5kb upstream 500 false Chr10: 40340164-40340663 Phaseolus vulgaris
Phvul.010G122200 0.5kb downstream 0.5kb downstream 4447 true Chr10: 40335717-40340163 Phaseolus vulgaris
Phvul.010G122200 0.5kb downstream 0.5kb downstream 500 false Chr10: 40335717-40336216 Phaseolus vulgaris
Phvul.010G122200 1.0kb upstream 1.0kb upstream 4947 true Chr10: 40336217-40341163 Phaseolus vulgaris
Phvul.010G122200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40340164-40341163 Phaseolus vulgaris
Phvul.010G122200 1.0kb downstream 1.0kb downstream 4947 true Chr10: 40335217-40340163 Phaseolus vulgaris
Phvul.010G122200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40335217-40336216 Phaseolus vulgaris
Phvul.010G122200 2.0kb upstream 2.0kb upstream 5947 true Chr10: 40336217-40342163 Phaseolus vulgaris
Phvul.010G122200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40340164-40342163 Phaseolus vulgaris
Phvul.010G122200 2.0kb downstream 2.0kb downstream 5947 true Chr10: 40334217-40340163 Phaseolus vulgaris
Phvul.010G122200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40334217-40336216 Phaseolus vulgaris
Phvul.010G122200 5.0kb upstream 5.0kb upstream 8947 true Chr10: 40336217-40345163 Phaseolus vulgaris
Phvul.010G122200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40340164-40345163 Phaseolus vulgaris
Phvul.010G122200 5.0kb downstream 5.0kb downstream 8947 true Chr10: 40331217-40340163 Phaseolus vulgaris
Phvul.010G122200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40331217-40336216 Phaseolus vulgaris
Phvul.010G122200 10.0kb upstream 10.0kb upstream 13947 true Chr10: 40336217-40350163 Phaseolus vulgaris
Phvul.010G122200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40340164-40350163 Phaseolus vulgaris
Phvul.010G122200 10.0kb downstream 10.0kb downstream 13947 true Chr10: 40326217-40340163 Phaseolus vulgaris
Phvul.010G122200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40326217-40336216 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314667 5265 Fabidae View MSA
124068785 5270 Rosid View MSA
123737965 5271 Pentapetalae View MSA
122792051 5272 Eudicot View MSA
122047363 5273 Angiosperm View MSA
121351004 5274 Embryophyte View MSA
123424117 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 137.292 0.0 404.8 High  
cufflinks 110.286 0.0 315.862 High  
cufflinks 97.6578 0.0 275.797 High  
cufflinks 156.483 0.0 464.569 High High
cufflinks 106.196 0.0 300.271 High  
cufflinks 102.489 0.0 291.282 High  
cufflinks 122.38 0.0 355.632 High  
cufflinks 103.236 0.0 294.209 High  
cufflinks 145.444 0.0 432.271 High High
cufflinks 82.6548 0.0 228.468 High Low
cufflinks 141.898 0.0 417.164 High  

0 Strain