Gene : Phvul.010G123066 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31707:SF55 - PECTINESTERASE 2-RELATED Genomic Order:  1236
Name:  ? Phvul.010G123066 Secondary Identifier:  ? PAC:37143206
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-1081 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G123066 0.5kb upstream 0.5kb upstream 4990 true Chr10: 40411708-40416697 Phaseolus vulgaris
Phvul.010G123066 0.5kb upstream 0.5kb upstream 500 false Chr10: 40411708-40412207 Phaseolus vulgaris
Phvul.010G123066 0.5kb downstream 0.5kb downstream 4990 true Chr10: 40412208-40417197 Phaseolus vulgaris
Phvul.010G123066 0.5kb downstream 0.5kb downstream 500 false Chr10: 40416698-40417197 Phaseolus vulgaris
Phvul.010G123066 1.0kb upstream 1.0kb upstream 5490 true Chr10: 40411208-40416697 Phaseolus vulgaris
Phvul.010G123066 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40411208-40412207 Phaseolus vulgaris
Phvul.010G123066 1.0kb downstream 1.0kb downstream 5490 true Chr10: 40412208-40417697 Phaseolus vulgaris
Phvul.010G123066 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40416698-40417697 Phaseolus vulgaris
Phvul.010G123066 2.0kb upstream 2.0kb upstream 6490 true Chr10: 40410208-40416697 Phaseolus vulgaris
Phvul.010G123066 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40410208-40412207 Phaseolus vulgaris
Phvul.010G123066 2.0kb downstream 2.0kb downstream 6490 true Chr10: 40412208-40418697 Phaseolus vulgaris
Phvul.010G123066 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40416698-40418697 Phaseolus vulgaris
Phvul.010G123066 5.0kb upstream 5.0kb upstream 9490 true Chr10: 40407208-40416697 Phaseolus vulgaris
Phvul.010G123066 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40407208-40412207 Phaseolus vulgaris
Phvul.010G123066 5.0kb downstream 5.0kb downstream 9490 true Chr10: 40412208-40421697 Phaseolus vulgaris
Phvul.010G123066 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40416698-40421697 Phaseolus vulgaris
Phvul.010G123066 10.0kb upstream 10.0kb upstream 14490 true Chr10: 40402208-40416697 Phaseolus vulgaris
Phvul.010G123066 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40402208-40412207 Phaseolus vulgaris
Phvul.010G123066 10.0kb downstream 10.0kb downstream 14490 true Chr10: 40412208-40426697 Phaseolus vulgaris
Phvul.010G123066 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40416698-40426697 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313065 5265 Fabidae View MSA
124060766 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.5391 0.0 53.2314   Low
cufflinks 119.17 0.0 365.574 High  
cufflinks 55.7812 0.0 154.055 High  
cufflinks 32.4672 0.0 86.2473    
cufflinks 61.8136 0.0 173.891 High  
cufflinks 83.9351 0.0 244.591 High  
cufflinks 114.7 0.0 355.213 High  
cufflinks 136.12 0.0 428.534 High  
cufflinks 102.07 0.0 310.61 High  
cufflinks 6.35028 0.0 17.0788   Low
cufflinks 86.3399 0.0 253.991 High  

0 Strain