Gene : Phvul.010G121600 P. vulgaris v2.1
Defline:  (1 of 3) KOG4650 - Predicted steroid reductase Genomic Order:  1221
Name:  ? Phvul.010G121600 Secondary Identifier:  ? PAC:37142941
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G121600 0.5kb upstream 0.5kb upstream 2282 true Chr10: 40272872-40275153 Phaseolus vulgaris
Phvul.010G121600 0.5kb upstream 0.5kb upstream 500 false Chr10: 40274654-40275153 Phaseolus vulgaris
Phvul.010G121600 0.5kb downstream 0.5kb downstream 2282 true Chr10: 40272372-40274653 Phaseolus vulgaris
Phvul.010G121600 0.5kb downstream 0.5kb downstream 500 false Chr10: 40272372-40272871 Phaseolus vulgaris
Phvul.010G121600 1.0kb upstream 1.0kb upstream 2782 true Chr10: 40272872-40275653 Phaseolus vulgaris
Phvul.010G121600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40274654-40275653 Phaseolus vulgaris
Phvul.010G121600 1.0kb downstream 1.0kb downstream 2782 true Chr10: 40271872-40274653 Phaseolus vulgaris
Phvul.010G121600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40271872-40272871 Phaseolus vulgaris
Phvul.010G121600 2.0kb upstream 2.0kb upstream 3782 true Chr10: 40272872-40276653 Phaseolus vulgaris
Phvul.010G121600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40274654-40276653 Phaseolus vulgaris
Phvul.010G121600 2.0kb downstream 2.0kb downstream 3782 true Chr10: 40270872-40274653 Phaseolus vulgaris
Phvul.010G121600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40270872-40272871 Phaseolus vulgaris
Phvul.010G121600 5.0kb upstream 5.0kb upstream 6782 true Chr10: 40272872-40279653 Phaseolus vulgaris
Phvul.010G121600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40274654-40279653 Phaseolus vulgaris
Phvul.010G121600 5.0kb downstream 5.0kb downstream 6782 true Chr10: 40267872-40274653 Phaseolus vulgaris
Phvul.010G121600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40267872-40272871 Phaseolus vulgaris
Phvul.010G121600 10.0kb upstream 10.0kb upstream 11782 true Chr10: 40272872-40284653 Phaseolus vulgaris
Phvul.010G121600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40274654-40284653 Phaseolus vulgaris
Phvul.010G121600 10.0kb downstream 10.0kb downstream 11782 true Chr10: 40262872-40274653 Phaseolus vulgaris
Phvul.010G121600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40262872-40272871 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303293 5265 Fabidae View MSA
124062639 5270 Rosid View MSA
123740313 5271 Pentapetalae View MSA
122796551 5272 Eudicot View MSA
122046311 5273 Angiosperm View MSA
123429173 5275 Viridiplantae View MSA
121346898 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.07038 0.0 6.98852   Low
cufflinks 4.39489 0.0 13.6146    
cufflinks 3.78778 0.0 11.948    
cufflinks 4.12165 0.0 12.9465    
cufflinks 4.92901 0.0 15.0935    
cufflinks 4.47914 0.0 13.8529    
cufflinks 9.25351 0.0 26.3669    
cufflinks 5.7838 0.0 17.3233    
cufflinks 33.7017 0.0 87.5151 High High
cufflinks 1.27572 0.0 4.53554   Low
cufflinks 5.59549 0.0 16.8947    

0 Strain