Gene : Phvul.006G060800 P. vulgaris v2.1
Defline:  (1 of 6) K07300 - Ca2+:H+ antiporter (chaA, CAX) Genomic Order:  579
Name:  ? Phvul.006G060800 Secondary Identifier:  ? PAC:37174035
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G060800 0.5kb upstream 0.5kb upstream 5554 true Chr06: 16928818-16934371 Phaseolus vulgaris
Phvul.006G060800 0.5kb upstream 0.5kb upstream 500 false Chr06: 16928818-16929317 Phaseolus vulgaris
Phvul.006G060800 0.5kb downstream 0.5kb downstream 5554 true Chr06: 16929318-16934871 Phaseolus vulgaris
Phvul.006G060800 0.5kb downstream 0.5kb downstream 500 false Chr06: 16934372-16934871 Phaseolus vulgaris
Phvul.006G060800 1.0kb upstream 1.0kb upstream 6054 true Chr06: 16928318-16934371 Phaseolus vulgaris
Phvul.006G060800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16928318-16929317 Phaseolus vulgaris
Phvul.006G060800 1.0kb downstream 1.0kb downstream 6054 true Chr06: 16929318-16935371 Phaseolus vulgaris
Phvul.006G060800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16934372-16935371 Phaseolus vulgaris
Phvul.006G060800 2.0kb upstream 2.0kb upstream 7054 true Chr06: 16927318-16934371 Phaseolus vulgaris
Phvul.006G060800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16927318-16929317 Phaseolus vulgaris
Phvul.006G060800 2.0kb downstream 2.0kb downstream 7054 true Chr06: 16929318-16936371 Phaseolus vulgaris
Phvul.006G060800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16934372-16936371 Phaseolus vulgaris
Phvul.006G060800 5.0kb upstream 5.0kb upstream 10054 true Chr06: 16924318-16934371 Phaseolus vulgaris
Phvul.006G060800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16924318-16929317 Phaseolus vulgaris
Phvul.006G060800 5.0kb downstream 5.0kb downstream 10054 true Chr06: 16929318-16939371 Phaseolus vulgaris
Phvul.006G060800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16934372-16939371 Phaseolus vulgaris
Phvul.006G060800 10.0kb upstream 10.0kb upstream 15054 true Chr06: 16919318-16934371 Phaseolus vulgaris
Phvul.006G060800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16919318-16929317 Phaseolus vulgaris
Phvul.006G060800 10.0kb downstream 10.0kb downstream 15054 true Chr06: 16929318-16944371 Phaseolus vulgaris
Phvul.006G060800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16934372-16944371 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306798 5265 Fabidae View MSA
124071439 5270 Rosid View MSA
123747660 5271 Pentapetalae View MSA
122792881 5272 Eudicot View MSA
122045212 5273 Angiosperm View MSA
121347037 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.11509 0.0 12.3252    
cufflinks 4.8235 0.0 17.3161   High
cufflinks 3.12305 0.0 12.5768    
cufflinks 4.82018 0.0 17.6899   High
cufflinks 3.98325 0.0 15.113    
cufflinks 3.70872 0.0 14.3432    
cufflinks 3.33763 0.0 13.2148    
cufflinks 2.43349 0.0 10.4914   Low
cufflinks 3.75999 0.0 14.8209    
cufflinks 4.4512 0.0 16.2129    
cufflinks 3.51297 0.0 14.4876    

0 Strain