Gene : Phvul.006G060900 P. vulgaris v2.1
Defline:  (1 of 1) K11129 - H/ACA ribonucleoprotein complex subunit 2 (NHP2, NOLA2) Genomic Order:  580
Name:  ? Phvul.006G060900 Secondary Identifier:  ? PAC:37172353
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G060900 0.5kb upstream 0.5kb upstream 1883 true Chr06: 16936382-16938264 Phaseolus vulgaris
Phvul.006G060900 0.5kb upstream 0.5kb upstream 500 false Chr06: 16937765-16938264 Phaseolus vulgaris
Phvul.006G060900 0.5kb downstream 0.5kb downstream 1883 true Chr06: 16935882-16937764 Phaseolus vulgaris
Phvul.006G060900 0.5kb downstream 0.5kb downstream 500 false Chr06: 16935882-16936381 Phaseolus vulgaris
Phvul.006G060900 1.0kb upstream 1.0kb upstream 2383 true Chr06: 16936382-16938764 Phaseolus vulgaris
Phvul.006G060900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16937765-16938764 Phaseolus vulgaris
Phvul.006G060900 1.0kb downstream 1.0kb downstream 2383 true Chr06: 16935382-16937764 Phaseolus vulgaris
Phvul.006G060900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16935382-16936381 Phaseolus vulgaris
Phvul.006G060900 2.0kb upstream 2.0kb upstream 3383 true Chr06: 16936382-16939764 Phaseolus vulgaris
Phvul.006G060900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16937765-16939764 Phaseolus vulgaris
Phvul.006G060900 2.0kb downstream 2.0kb downstream 3383 true Chr06: 16934382-16937764 Phaseolus vulgaris
Phvul.006G060900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16934382-16936381 Phaseolus vulgaris
Phvul.006G060900 5.0kb upstream 5.0kb upstream 6383 true Chr06: 16936382-16942764 Phaseolus vulgaris
Phvul.006G060900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16937765-16942764 Phaseolus vulgaris
Phvul.006G060900 5.0kb downstream 5.0kb downstream 6383 true Chr06: 16931382-16937764 Phaseolus vulgaris
Phvul.006G060900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16931382-16936381 Phaseolus vulgaris
Phvul.006G060900 10.0kb upstream 10.0kb upstream 11383 true Chr06: 16936382-16947764 Phaseolus vulgaris
Phvul.006G060900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16937765-16947764 Phaseolus vulgaris
Phvul.006G060900 10.0kb downstream 10.0kb downstream 11383 true Chr06: 16926382-16937764 Phaseolus vulgaris
Phvul.006G060900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16926382-16936381 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040888 5273 Angiosperm View MSA
122303873 5265 Fabidae View MSA
124066793 5270 Rosid View MSA
123737256 5271 Pentapetalae View MSA
122793138 5272 Eudicot View MSA
121345742 5274 Embryophyte View MSA
123425979 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 91.6301 0.0 238.056 High  
cufflinks 130.943 0.0 346.892 High High
cufflinks 19.389 0.0 53.1506   Low
cufflinks 82.4339 0.0 213.473 High  
cufflinks 85.9033 0.0 222.744 High  
cufflinks 15.2222 0.0 42.7224   Low
cufflinks 58.9386 0.0 152.365 High  
cufflinks 59.0808 0.0 152.717 High  
cufflinks 74.7778 0.0 193.584 High  
cufflinks 48.1221 0.0 124.905 High  
cufflinks 85.8814 0.0 222.849 High  

0 Strain