Gene : Phvul.010G105500 P. vulgaris v2.1
Defline:  (1 of 1) KOG0999//KOG4304 - Microtubule-associated protein Bicaudal-D // Transcriptional repressors of the hairy/E(spl) family (contains HLH) Genomic Order:  1061
Name:  ? Phvul.010G105500 Secondary Identifier:  ? PAC:37143911
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G105500 0.5kb upstream 0.5kb upstream 11927 true Chr10: 37636665-37648591 Phaseolus vulgaris
Phvul.010G105500 0.5kb upstream 0.5kb upstream 500 false Chr10: 37648092-37648591 Phaseolus vulgaris
Phvul.010G105500 0.5kb downstream 0.5kb downstream 11927 true Chr10: 37636165-37648091 Phaseolus vulgaris
Phvul.010G105500 0.5kb downstream 0.5kb downstream 500 false Chr10: 37636165-37636664 Phaseolus vulgaris
Phvul.010G105500 1.0kb upstream 1.0kb upstream 12427 true Chr10: 37636665-37649091 Phaseolus vulgaris
Phvul.010G105500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 37648092-37649091 Phaseolus vulgaris
Phvul.010G105500 1.0kb downstream 1.0kb downstream 12427 true Chr10: 37635665-37648091 Phaseolus vulgaris
Phvul.010G105500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 37635665-37636664 Phaseolus vulgaris
Phvul.010G105500 2.0kb upstream 2.0kb upstream 13427 true Chr10: 37636665-37650091 Phaseolus vulgaris
Phvul.010G105500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 37648092-37650091 Phaseolus vulgaris
Phvul.010G105500 2.0kb downstream 2.0kb downstream 13427 true Chr10: 37634665-37648091 Phaseolus vulgaris
Phvul.010G105500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 37634665-37636664 Phaseolus vulgaris
Phvul.010G105500 5.0kb upstream 5.0kb upstream 16427 true Chr10: 37636665-37653091 Phaseolus vulgaris
Phvul.010G105500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 37648092-37653091 Phaseolus vulgaris
Phvul.010G105500 5.0kb downstream 5.0kb downstream 16427 true Chr10: 37631665-37648091 Phaseolus vulgaris
Phvul.010G105500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 37631665-37636664 Phaseolus vulgaris
Phvul.010G105500 10.0kb upstream 10.0kb upstream 21427 true Chr10: 37636665-37658091 Phaseolus vulgaris
Phvul.010G105500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 37648092-37658091 Phaseolus vulgaris
Phvul.010G105500 10.0kb downstream 10.0kb downstream 21427 true Chr10: 37626665-37648091 Phaseolus vulgaris
Phvul.010G105500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 37626665-37636664 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040868 5273 Angiosperm View MSA
122311582 5265 Fabidae View MSA
124068904 5270 Rosid View MSA
123737854 5271 Pentapetalae View MSA
122792904 5272 Eudicot View MSA
121351125 5274 Embryophyte View MSA
123428161 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.31493 0.0 10.2722   Low
cufflinks 3.67748 0.0 14.5148    
cufflinks 6.79276 0.0 23.2812   High
cufflinks 3.56601 0.0 14.4851    
cufflinks 4.38387 0.0 16.9276    
cufflinks 6.08211 0.0 21.3558   High
cufflinks 5.24315 0.0 19.0133    
cufflinks 4.7982 0.0 17.3638    
cufflinks 4.53866 0.0 17.108    
cufflinks 5.3346 0.0 19.5608    
cufflinks 4.78053 0.0 18.2454    

0 Strain